Miyakogusa Predicted Gene
- Lj5g3v2258330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2258330.1 Non Chatacterized Hit- tr|G7IDC2|G7IDC2_MEDTR
MscS family protein, putative OS=Medicago truncatula G,78.31,0,Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; se,CUFF.57081.1
(2793 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58146 similar to UniRef100_A7P8H8 Cluster: Chromosome... 1550 0.0
gnl|LJGI|FS350219 weakly similar to UniRef100_UPI000034ED29 Clus... 418 e-116
>gnl|LJGI|TC58146 similar to UniRef100_A7P8H8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 783
Score = 1550 bits (782), Expect = 0.0
Identities = 782/782 (100%)
Strand = Plus / Plus
Query: 3 gcaatctatccgaaaatccttcaaatcttatggttccgataacaaacactctagaaggtt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcaatctatccgaaaatccttcaaatcttatggttccgataacaaacactctagaaggtt 61
Query: 63 ctccgccaccggaaaccctgacaccgaccaagaacactaccctattcttctcgatcagga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctccgccaccggaaaccctgacaccgaccaagaacactaccctattcttctcgatcagga 121
Query: 123 aacccctcaccaccaccaccactcttttcccatggccggcgacgtcgtcgtcaagatcaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aacccctcaccaccaccaccactcttttcccatggccggcgacgtcgtcgtcaagatcaa 181
Query: 183 cgacgacggagacgacagagaccctgcaaccattgaagctagcaagatttggagagagtc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgacgacggagacgacagagaccctgcaaccattgaagctagcaagatttggagagagtc 241
Query: 243 cagctacgatttctggtcgaacagaaacggttccggcggtgacaatgcccgcgaggagag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagctacgatttctggtcgaacagaaacggttccggcggtgacaatgcccgcgaggagag 301
Query: 303 ctttgatttccgccgcaagtcggcggaggatccgccgtcgcagctgattgggaggtttct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctttgatttccgccgcaagtcggcggaggatccgccgtcgcagctgattgggaggtttct 361
Query: 363 ccacaagcagaaggcgtctggtgatttctcgctggatatggatttggagatggatgagct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccacaagcagaaggcgtctggtgatttctcgctggatatggatttggagatggatgagct 421
Query: 423 tcagaatgaagcccgggagaagctggcgccggtggaggaatctccgacggtgacgcatcg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcagaatgaagcccgggagaagctggcgccggtggaggaatctccgacggtgacgcatcg 481
Query: 483 gatatccagggagctgaaggtttcgtttgaggagcctacgtccaatgtggtggagcctgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatatccagggagctgaaggtttcgtttgaggagcctacgtccaatgtggtggagcctgc 541
Query: 543 tggggagcatgtgaggaggaggcctagtaaggattcgccgtcgctggcggattttcagag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tggggagcatgtgaggaggaggcctagtaaggattcgccgtcgctggcggattttcagag 601
Query: 603 gcctccgcatccgccgcagcatcatgaacgtcgccggtcgccgtctccggcggggaatgg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gcctccgcatccgccgcagcatcatgaacgtcgccggtcgccgtctccggcggggaatgg 661
Query: 663 tcgtgatggggaggttgttatgtgctctgccaacgcttcgtttgaacggaacctttctat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcgtgatggggaggttgttatgtgctctgccaacgcttcgtttgaacggaacctttctat 721
Query: 723 gcagaggagatctacgttgatgaagaccaaaacgaagtccaggttgatggacccgcctga 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcagaggagatctacgttgatgaagaccaaaacgaagtccaggttgatggacccgcctga 781
Query: 783 gg 784
||
Sbjct: 782 gg 783
>gnl|LJGI|FS350219 weakly similar to UniRef100_UPI000034ED29 Cluster: mechanosensitive
ion channel domain-containing protein / MS ion channel
domain-containing protein; n=1; Arabidopsis thaliana|Rep:
mechanosensitive ion channel domain-containing protein /
MS ion channel domain-containing protein - Arabidopsis
thaliana, partial (7%)
Length = 654
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 2583 ggtgagaatggcgatctggccaactcacagaatgaacttccaagacatgggggaaaggtt 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggtgagaatggcgatctggccaactcacagaatgaacttccaagacatgggggaaaggtt 595
Query: 2643 tgtcagaagatcccttttgcttgaagaaatgatcaagattttccgggagcttgacattca 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgtcagaagatcccttttgcttgaagaaatgatcaagattttccgggagcttgacattca 535
Query: 2703 ttaccgtctcctgcctctcgacattaacgttagagctttgcctaccacttctgaaaggct 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttaccgtctcctgcctctcgacattaacgttagagctttgcctaccacttctgaaaggct 475
Query: 2763 tccacctagttgggcaaacatcacaaactga 2793
|||||||||||||||||||||||||||||||
Sbjct: 474 tccacctagttgggcaaacatcacaaactga 444