Miyakogusa Predicted Gene
- Lj5g3v2256180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2256180.1 Non Chatacterized Hit- tr|B9S5H4|B9S5H4_RICCO
Tetracycline transporter, putative OS=Ricinus
communis,76.36,1e-16,MFS_1,Major facilitator superfamily; MFS general
substrate transporter,Major facilitator superfamily,CUFF.57074.1
(1350 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80911 weakly similar to UniRef100_A7P8G7 Cluster: Chr... 1487 0.0
gnl|LJGI|TC69387 190 2e-47
gnl|LJGI|AV774628 143 3e-33
>gnl|LJGI|TC80911 weakly similar to UniRef100_A7P8G7 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (43%)
Length = 804
Score = 1487 bits (750), Expect = 0.0
Identities = 750/750 (100%)
Strand = Plus / Plus
Query: 1 atggtgatggaggggttaacagggctgagccaccttttcgtgaccatgtttcttacgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggtgatggaggggttaacagggctgagccaccttttcgtgaccatgtttcttacgggt 114
Query: 61 tttggcggcgtcatagctattccggcgatcacagatatcaccatggctgcactctgcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tttggcggcgtcatagctattccggcgatcacagatatcaccatggctgcactctgcccc 174
Query: 121 ggtcaggatgagtgctctctcgccatttacctcaccggtttccagcaagctatgattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ggtcaggatgagtgctctctcgccatttacctcaccggtttccagcaagctatgattgga 234
Query: 181 gtggggtcagtggtgacgacgccattaatagggaacttgtccgaccgatacggtcgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gtggggtcagtggtgacgacgccattaatagggaacttgtccgaccgatacggtcgaaaa 294
Query: 241 gccttactcacacttcctcttactgtgtcggtcattcctcaagtgatattggcatatagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gccttactcacacttcctcttactgtgtcggtcattcctcaagtgatattggcatatagc 354
Query: 301 agggataccaagttcttctatgtgtactatgtggtcagaactcttgctgccattgcaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agggataccaagttcttctatgtgtactatgtggtcagaactcttgctgccattgcaggc 414
Query: 361 gaaggcagctcccattgcctagctcttgcatatgtggcagacaaggttccagatgggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaaggcagctcccattgcctagctcttgcatatgtggcagacaaggttccagatgggaga 474
Query: 421 aggacaacagcatttggaatacttgctggtgtaggatcagcagcatttgttggtggtaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aggacaacagcatttggaatacttgctggtgtaggatcagcagcatttgttggtggtaca 534
Query: 481 ttagctgctcgtttcctacccactgctttgatatttcaggtttctgcagtcttctcaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttagctgctcgtttcctacccactgctttgatatttcaggtttctgcagtcttctcaatg 594
Query: 541 attggtttggtatacatgagaattttccttaaggatagtgtacctggtggtggcatgagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 attggtttggtatacatgagaattttccttaaggatagtgtacctggtggtggcatgagg 654
Query: 601 cagccattattgaaggaggctgaggaaccatgtcttgaacagtgtgcggatgattcatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cagccattattgaaggaggctgaggaaccatgtcttgaacagtgtgcggatgattcatcg 714
Query: 661 aacaggacaacaggaacatttaagaaactgccttcgttgggggatgtaatttgtttgctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aacaggacaacaggaacatttaagaaactgccttcgttgggggatgtaatttgtttgctg 774
Query: 721 aagtgcagccccacattctcacaagcagcg 750
||||||||||||||||||||||||||||||
Sbjct: 775 aagtgcagccccacattctcacaagcagcg 804
>gnl|LJGI|TC69387
Length = 649
Score = 190 bits (96), Expect = 2e-47
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1255 acagcatttttccttagtctaatgatccgtgctgatccccctattgccaatgacaaagtt 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagcatttttccttagtctaatgatccgtgctgatccccctattgccaatgacaaagtt 60
Query: 1315 agtagtaaccgctgcgcgcctacattggcttaaggc 1350
||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtagtaaccgctgcgcgcctacattggcttaaggc 96
>gnl|LJGI|AV774628
Length = 127
Score = 143 bits (72), Expect = 3e-33
Identities = 117/129 (90%), Gaps = 6/129 (4%)
Strand = Plus / Plus
Query: 732 cacattctcacaagcagcggttgtttttctcttcaatagtcttgcagatggtggcttgat 791
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacattctcacaagcaggg--tgtttttctcttcaatagtcttgcagatggtggcttgat 58
Query: 792 gtctata--ttgctgtactattt--aaaggcgcgttttcagtacaacaagaaccagtttg 847
||||||| | |||||||||| | | |||||||||||||||||||||||||||||| |
Sbjct: 59 gtctatagttggctgtactatgtgacagggcgcgttttcagtacaacaagaaccagttgg 118
Query: 848 ctgatttga 856
|||||||||
Sbjct: 119 ctgatttga 127