Miyakogusa Predicted Gene
- Lj5g3v2256170.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2256170.2 tr|G7ZYS2|G7ZYS2_MEDTR Coatomer subunit delta
OS=Medicago truncatula GN=MTR_077s0036 PE=4
SV=1,92.53,0,Adap_comp_sub,Clathrin adaptor, mu subunit, C-terminal;
COATOMER SUBUNIT DELTA,NULL; MHD,Clathrin ad,CUFF.57076.2
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72025 similar to UniRef100_A7P2Q5 Cluster: Chromosome... 803 0.0
gnl|LJGI|BP041066 similar to UniRef100_A7P2Q5 Cluster: Chromosom... 515 e-146
>gnl|LJGI|TC72025 similar to UniRef100_A7P2Q5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1123
Score = 803 bits (405), Expect = 0.0
Identities = 495/525 (94%)
Strand = Plus / Plus
Query: 1 atgaataaagaattatttgccaatgaaaacaaactaggcctaaaggatccaaataggcct 60
||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 327 atgaacaaagaattatttgccaatgaaaacatactaggcctaaaggatccaaacaggcct 386
Query: 61 ttccccactggtcaagccagtgatgctggaggtgttggtcttctaaagtggagaatgcaa 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 387 ttccccactggtcaagccagtgatgctggaggtgtcggtcttctaaagtggagaatgcaa 446
Query: 121 agcaccgacgagtcaatggtgccactgacaatcaactgctggccctcttcttctggaaat 180
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agcactgatgagtcaatggtgccactgacaatcaactgctggccctcttcttctggaaat 506
Query: 181 gaaacttatgtcagcattgaatatgaggcttcatcaatgtttgatctgcggaatgttgta 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaaacttatgtcagcatcgaatatgaggcttcatcaatgtttgatctgcggaatgttgtg 566
Query: 241 atctcagtacctcttccagctcttcgtgatgcgccatctgtttcacagatcgatggggag 300
|||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||
Sbjct: 567 atctcagtacctcttccagctcttcgagatgcaccatctgtctcacagattgatggagag 626
Query: 301 tggaggtatgactctaggaattccattttggagtggtctgtcattctgatcgataattct 360
|||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 627 tggaggtatgaccctaggaattccattttggagtggtctgtccttctgattgataattca 686
Query: 361 aatcgcagtgggtcaatggagtttgtcgttccacaagcggactcgtcggcattctttccc 420
|||||||||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 687 aatcgcagtgggtcgatggagtttgttgttcctcaagcggactcatctgcattctttccc 746
Query: 421 atttcagttcgttttatggcaactgatacatttagtgagctgaaggttacaaacatctta 480
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 747 atttcagttcgttttatggcaactgatacatttagtgacctgaaggtgacaaacatcata 806
Query: 481 ccacaaaagggtggtaatcctcccaaattttctcagagaacacag 525
|||| ||||||||||||||||||||| | ||||||||||||||
Sbjct: 807 ccactaaagggtggtaatcctcccaagcatgctcagagaacacag 851
>gnl|LJGI|BP041066 similar to UniRef100_A7P2Q5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 490
Score = 515 bits (260), Expect = e-146
Identities = 260/260 (100%)
Strand = Plus / Minus
Query: 266 gtgatgcgccatctgtttcacagatcgatggggagtggaggtatgactctaggaattcca 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtgatgcgccatctgtttcacagatcgatggggagtggaggtatgactctaggaattcca 431
Query: 326 ttttggagtggtctgtcattctgatcgataattctaatcgcagtgggtcaatggagtttg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttttggagtggtctgtcattctgatcgataattctaatcgcagtgggtcaatggagtttg 371
Query: 386 tcgttccacaagcggactcgtcggcattctttcccatttcagttcgttttatggcaactg 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgttccacaagcggactcgtcggcattctttcccatttcagttcgttttatggcaactg 311
Query: 446 atacatttagtgagctgaaggttacaaacatcttaccacaaaagggtggtaatcctccca 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atacatttagtgagctgaaggttacaaacatcttaccacaaaagggtggtaatcctccca 251
Query: 506 aattttctcagagaacacag 525
||||||||||||||||||||
Sbjct: 250 aattttctcagagaacacag 231