Miyakogusa Predicted Gene

Lj5g3v2244610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2244610.1 Non Chatacterized Hit- tr|I1HWI3|I1HWI3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,44.58,0.0000000001,HLH, helix-loop-helix DNA-binding
domain,Helix-loop-helix domain; ACT-like,NULL; no
description,Heli,CUFF.57039.1
         (1503 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76489 similar to UniRef100_A7P8D1 Cluster: Chromosome...   708   0.0  

>gnl|LJGI|TC76489 similar to UniRef100_A7P8D1 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (15%)
          Length = 494

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1147 actgacaagcaaacacagcaaatggagcctcaagtggaagtggctctcatagatgggaat 1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    actgacaagcaaacacagcaaatggagcctcaagtggaagtggctctcatagatgggaat 60

                                                                        
Query: 1207 gagtactttgtgaaggtgttctgtgagcacaggcctggagggtttgggaaattgatggag 1266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gagtactttgtgaaggtgttctgtgagcacaggcctggagggtttgggaaattgatggag 120

                                                                        
Query: 1267 gctttgaacacccttggcatggatgtagtacatgccacagtgaccagccacaaggggctg 1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gctttgaacacccttggcatggatgtagtacatgccacagtgaccagccacaaggggctg 180

                                                                        
Query: 1327 gtgtcaaatgtttttaaagtggagaaaaaggacagtgaaatggttgaggctgaggatgta 1386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gtgtcaaatgtttttaaagtggagaaaaaggacagtgaaatggttgaggctgaggatgta 240

                                                                        
Query: 1387 agagactcactactagagcttacaaggaacagaacaagagggtggagtcatgagatgaca 1446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  agagactcactactagagcttacaaggaacagaacaagagggtggagtcatgagatgaca 300

                                                                     
Query: 1447 gcaacatcagaaaatggtgtgggcagcagggaacagcatcacctcaacaaccaccag 1503
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gcaacatcagaaaatggtgtgggcagcagggaacagcatcacctcaacaaccaccag 357