Miyakogusa Predicted Gene

Lj5g3v2241420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2241420.1 Non Chatacterized Hit- tr|B9RP36|B9RP36_RICCO
Clathrin assembly protein, putative OS=Ricinus
communi,38.98,1.4,seg,NULL,CUFF.57031.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64331 similar to UniRef100_Q42155 Cluster: NADH dehoy...   765   0.0  

>gnl|LJGI|TC64331 similar to UniRef100_Q42155 Cluster: NADH dehoydrogenase; n=2;
           Arabidopsis thaliana|Rep: NADH dehoydrogenase -
           Arabidopsis thaliana (Mouse-ear cress), partial (72%)
          Length = 694

 Score =  765 bits (386), Expect = 0.0
 Identities = 386/386 (100%)
 Strand = Plus / Plus

                                                                       
Query: 67  tggtgtggaattgagattgttgaagaagaagatggcaacaggagaaggatcatcgaagaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28  tggtgtggaattgagattgttgaagaagaagatggcaacaggagaaggatcatcgaagaa 87

                                                                       
Query: 127 gatgattgctacgccggaggagatggtggaagcgagggttccgttggcgtacagagacga 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  gatgattgctacgccggaggagatggtggaagcgagggttccgttggcgtacagagacga 147

                                                                       
Query: 187 gtgcgcacatttgctgatccctctcaacaagtgcaggcaagcggagttctacctcccatg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gtgcgcacatttgctgatccctctcaacaagtgcaggcaagcggagttctacctcccatg 207

                                                                       
Query: 247 gaagtgcgagaacgaacgccactcttacgagaagtgcgagtacgagctcgtcatggaacg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaagtgcgagaacgaacgccactcttacgagaagtgcgagtacgagctcgtcatggaacg 267

                                                                       
Query: 307 gatgcttcagatgaagaagatccgcgaacaatccaaacaaactctccctcaagctgctgc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gatgcttcagatgaagaagatccgcgaacaatccaaacaaactctccctcaagctgctgc 327

                                                                       
Query: 367 tggtggcgcctccgttcccctcatccccaaacctgcaaatgcctgatgaatgaattgaag 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tggtggcgcctccgttcccctcatccccaaacctgcaaatgcctgatgaatgaattgaag 387

                                     
Query: 427 gaacctttgcttgcttcggatggatg 452
           ||||||||||||||||||||||||||
Sbjct: 388 gaacctttgcttgcttcggatggatg 413