Miyakogusa Predicted Gene

Lj5g3v2241250.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2241250.1 tr|B7EG35|B7EG35_ORYSJ cDNA clone:J023010F18,
full insert sequence OS=Oryza sativa subsp. japonica
P,72,0.00000000001,no description,PSPTO4464-like domain;
DUF615,Ribosome-associated, YjgA; seg,NULL;
coiled-coil,NULL,CUFF.57018.1
         (894 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP056759 similar to UniRef100_A7NSU1 Cluster: Chromosom...  1078   0.0  
gnl|LJGI|FS319240 similar to UniRef100_A7PJR8 Cluster: Chromosom...    54   2e-06
gnl|LJGI|TC58454 homologue to UniRef100_Q7SD75 Cluster: Predicte...    52   6e-06

>gnl|LJGI|BP056759 similar to UniRef100_A7NSU1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 551

 Score = 1078 bits (544), Expect = 0.0
 Identities = 551/552 (99%), Gaps = 1/552 (0%)
 Strand = Plus / Plus

                                                                       
Query: 32  aatggccatggttgcacttgcaccaccgtggttgtgctaacgcggcactccaccaccacc 91
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatggccatggttgca-ttgcaccaccgtggttgtgctaacgcggcactccaccaccacc 59

                                                                       
Query: 92  gccaccgtcatcttcttcttcttctaccctctccaccagaacccacaaggacaacttcaa 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  gccaccgtcatcttcttcttcttctaccctctccaccagaacccacaaggacaacttcaa 119

                                                                       
Query: 152 atcctcatcgtttctcctcggccgctctcgcttcctctcgccggagcgccaatgttcccc 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atcctcatcgtttctcctcggccgctctcgcttcctctcgccggagcgccaatgttcccc 179

                                                                       
Query: 212 aaaccaccaccgaactggactccgattccgagtccaagaagagccgcaacgagttgaagc 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aaaccaccaccgaactggactccgattccgagtccaagaagagccgcaacgagttgaagc 239

                                                                       
Query: 272 gggaagcaaggcgcgctgtcaagtggggaatggacttggcttccttctctgctccccaaa 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gggaagcaaggcgcgctgtcaagtggggaatggacttggcttccttctctgctccccaaa 299

                                                                       
Query: 332 tcaaacgcgtccttagggtgctttcattggacgaagttgtgttcgaagctcttatggttg 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcaaacgcgtccttagggtgctttcattggacgaagttgtgttcgaagctcttatggttg 359

                                                                       
Query: 392 ttaagagactgggaccagatgttcgagaaggaaggagaagacagttcagttatattggaa 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttaagagactgggaccagatgttcgagaaggaaggagaagacagttcagttatattggaa 419

                                                                       
Query: 452 aattgctgcggggagcggatcctgagttaatggatcgattgataagagcaacaagggatt 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aattgctgcggggagcggatcctgagttaatggatcgattgataagagcaacaagggatt 479

                                                                       
Query: 512 cggatcaaaaggagctgcaagctttaactggtttagtctctgacgatgttgaagaggatg 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cggatcaaaaggagctgcaagctttaactggtttagtctctgacgatgttgaagaggatg 539

                       
Query: 572 atgacataatag 583
           ||||||||||||
Sbjct: 540 atgacataatag 551


>gnl|LJGI|FS319240 similar to UniRef100_A7PJR8 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (57%)
          Length = 683

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 81  ccaccaccaccgccaccgtcatcttcttcttcttc 115
           ||||||||||| |||||||| ||||||||||||||
Sbjct: 60  ccaccaccaccaccaccgtcttcttcttcttcttc 26


>gnl|LJGI|TC58454 homologue to UniRef100_Q7SD75 Cluster: Predicted protein; n=1;
           Neurospora crassa|Rep: Predicted protein - Neurospora
           crassa, partial (3%)
          Length = 797

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 81  ccaccaccaccgccaccgtcatcttcttcttctt 114
           ||||||||||| ||||| ||||||||||||||||
Sbjct: 158 ccaccaccaccaccaccatcatcttcttcttctt 191