Miyakogusa Predicted Gene
- Lj5g3v2241240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2241240.1 Non Chatacterized Hit- tr|I1MJ51|I1MJ51_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48606
PE,84.05,0,U520,NULL; HELICASE SKI2W,NULL; Sec63,Sec63 domain;
DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-ter,CUFF.57016.1
(2865 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71601 homologue to UniRef100_A7QM75 Cluster: Chromoso... 793 0.0
gnl|LJGI|GO041770 similar to UniRef100_A7QM75 Cluster: Chromosom... 533 e-150
gnl|LJGI|GO035592 similar to UniRef100_A7QM75 Cluster: Chromosom... 355 1e-96
gnl|LJGI|TC57784 similar to UniRef100_UPI000019718F Cluster: sec... 58 3e-07
gnl|LJGI|FS336871 similar to UniRef100_Q8L744 Cluster: At1g73430... 54 5e-06
gnl|LJGI|TC80555 similar to UniRef100_Q9M0V3 Cluster: DNA damage... 54 5e-06
gnl|LJGI|TC79996 similar to UniRef100_A7Q0U2 Cluster: Chromosome... 54 5e-06
>gnl|LJGI|TC71601 homologue to UniRef100_A7QM75 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 963
Score = 793 bits (400), Expect = 0.0
Identities = 618/691 (89%), Gaps = 6/691 (0%)
Strand = Plus / Plus
Query: 2165 gtgccaagatcaatattttgctgcaagcatacatttcacaattaaaggttgaagggctct 2224
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 1 gtgccaagatcaatgttttgctgcaagcatacatttcacaattaaagcttgaagggctat 60
Query: 2225 cgctgacatctgatatggtctttataactcagagtgctggacgccttttgcgggctcttt 2284
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cactgacatctgatatggtctttataactcagagtgctggacgccttttgcgggctcttt 120
Query: 2285 ttgagattgtcttgaaacgtggctgggcgcaatcggctgaaaaggctttgaacttattca 2344
||||||||||| |||||||||||||||| || | |||||||||||||||||| |||| ||
Sbjct: 121 ttgagattgtcctgaaacgtggctgggcacagttggctgaaaaggctttgaatttatgca 180
Query: 2345 agatggtgactaagaaga------gtgtccaaacaccgcttcggcagttcaatgggatcc 2398
|||||||||| |||| || ||||||||||||| ||||| ||||||||||| ||||
Sbjct: 181 agatggtgaccaagaggatgtggagtgtccaaacacctcttcgtcagttcaatggaatcc 240
Query: 2399 caagttatatattaactaagatggaaaagaaagatttggcttgggaaaggtattatgacc 2458
||||| || ||||||| ||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 caagtgatgtattaacgaagttggaaaagaaagatttggcctgggaaaggtattatgacc 300
Query: 2459 tatcatcacaagagttagctgagctcatccctgcacacaagatgggaaggacacttcata 2518
||||| |||||||| || ||| ||||| | |||| |||||||||||||||||||||||
Sbjct: 301 tatcaccacaagagataagtgaactcattcgtgcaaccaagatgggaaggacacttcata 360
Query: 2519 aacttatccaccaatttccaaaattgaaccttgaagcacatatagagtcaattacgtgca 2578
|| |||||||||||||||||||| ||||||||| ||||||| | || ||||||| |||
Sbjct: 361 aatttatccaccaatttccaaaactgaaccttgcagcacatgtgcagccaattactcgca 420
Query: 2579 ccgttttgagggttgagctcacgttaactccagattttgcatgggatgacagagtccatg 2638
| |||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||
Sbjct: 421 cggttttgggggttgaactcacaataactccggattttgcatgggatgacaatatccatg 480
Query: 2639 gaaatgttgagccattctgggtgattgtggaggataatgatggtgaatatattcttcacc 2698
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 gatatgttgagccattctgggtgattgtggaggataatgatggtgaatatattcttcatc 540
Query: 2699 atgagtattttatgctgaaaaaacaagatatttctgaggatcacactctaaatttcgtgg 2758
||||||||||| |||||||||| ||| ||||| ||||||||| ||||| |||||| |
Sbjct: 541 atgagtattttttgctgaaaaagcaatatattgatgaggatcatactctgaatttcacag 600
Query: 2759 tgccaatatcccagcctcttcctccccaattccttatccgtgttgtttcagatagatggc 2818
||||||||| | ||||||||||||| |||| | ||||| ||||||||||||||| |||||
Sbjct: 601 tgccaatatacgagcctcttcctcctcaatactttatctgtgttgtttcagataaatggc 660
Query: 2819 tcggatcacaaactgttttacctgtttcatt 2849
| |||||||||||||||||||||||||||||
Sbjct: 661 ttggatcacaaactgttttacctgtttcatt 691
>gnl|LJGI|GO041770 similar to UniRef100_A7QM75 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 876
Score = 533 bits (269), Expect = e-150
Identities = 464/529 (87%)
Strand = Plus / Minus
Query: 886 agtattgttgctagaacaattaggcagatagaaaccacagaggacaatattcggttggtg 945
|||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 825 agtattgttgctagaacagttaggcagatagaaaccacgaaggactatattcggttggtg 766
Query: 946 gggttgtgtgctaatcttcctaattatgaagatgtggcactctttttatgtgtggatccg 1005
||||||| ||||| |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 765 gggttgtctgctacccttcctaattatgaagatgtggcactgtttttgtgtgttgatctt 706
Query: 1006 gacaacgagttgttttattttgataatgatgataggcctgttcatctttatcagcagtat 1065
|||| | ||||||||||||||||||| | |||||||||||| ||||| ||| ||||||
Sbjct: 705 aacaaggggttgttttattttgataatagttataggcctgttcctctttctcaacagtat 646
Query: 1066 gctggaatcacagttacagagccccttcagaggctccagttgatgaatgatatatgttat 1125
|||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 645 attggaatcacagttaagaagccgcttcagaggttccagttgatgaatgatatctgttac 586
Query: 1126 gagaaaattatggatgtagctggaatgaatcgggttcttatctttgtgcattcaaggaaa 1185
|||||| || | | ||||||||||| | ||| ||||||||||||||| ||||||||||||
Sbjct: 585 gagaaagttttaggtgtagctggaaagcatcaggttcttatctttgtacattcaaggaaa 526
Query: 1186 gaaactgctaaaacagctagagccatcagagatactgtactagccaatgatactcttggt 1245
|||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||
Sbjct: 525 gaaactgctaaaactgctagagccatcagagatactgcacttgcaaatgatactcttggt 466
Query: 1246 aggctccttcgagaagatagtgcaagtcgcaagattcttctcactcatactgatctcgtg 1305
||| ||||| |||||||||||| |||||| ||||||||| | |||||||||| || |||
Sbjct: 465 aggttccttaaagaagatagtgctagtcgcgagattcttcactctcatactgaacttgtg 406
Query: 1306 aacagcaatgatcttaaagatcttctgccctatggattttcaattcatcatgctggtatg 1365
| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 405 aggagcaatgatcttaaagatcttctgtcctatggttttgcaattcatcatgctggtatg 346
Query: 1366 acaagggcagatcgtcagcttgttgaggacctctttgctgatggacatg 1414
| ||||||||||| | ||||||| ||| ||||||| |||||| ||||
Sbjct: 345 aacagggcagatcgcaatcttgttggggatctctttgttgatggtcatg 297
>gnl|LJGI|GO035592 similar to UniRef100_A7QM75 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 517
Score = 355 bits (179), Expect = 1e-96
Identities = 322/367 (87%), Gaps = 2/367 (0%)
Strand = Plus / Plus
Query: 351 accctttgatcctaatgagaagcttgtgaaaatatcttcaatgcctgattgggcacaacc 410
|||| ||||| |||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 149 accccttgattctaatgagaagcttgtaaaaatatcttctatacctgattgggcacaacc 208
Query: 411 cgccttcaaagggatgacacacttgaataggattcagaccaaggtctatgatactgcact 470
|||||| ||||| ||||| || |||||||| |||||| |||||||||||| || |||||
Sbjct: 209 cgcctttaaaggaatgacgcagctgaatagggttcagagcaaggtctatgagacggcact 268
Query: 471 cttcaagcctcacaatcttctgctctgtgctccaactggctctggaaaatttgatgttgc 530
||||| |||| | ||||||||||| |||||||||||||| |||||||| | |||||||
Sbjct: 269 cttcaggcctgataatcttctgctttgtgctccaactggggctggaaaaactaatgttgc 328
Query: 531 tgttctcaccatacttcagctaattgc-aggctacaggaatcaggagagcggttcaattg 589
|||||||| || ||||||| |||||| |||| ||||||||| ||| ||||| ||||
Sbjct: 329 agttctcacgatgcttcagcaaattgcgaggc-acaggaatcctgaggatggttccattg 387
Query: 590 accatagtgcttataagattgtctatgttgcgcctatgaaagctctcgtcgctgaggttg 649
|||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 388 accacagtgcttataagattgtttatgttgcgcctatgaaagctctcgtggctgaggttg 447
Query: 650 tagggaatttatccaatcgtttgcacgaaaatgatgttaaggttagggacctcagtggag 709
|||||||||| |||||||||||||| ||| ||| ||||| |||||||| ||||||||||
Sbjct: 448 tagggaatttgtccaatcgtttgcaggaatatggtgttacagttagggagctcagtggag 507
Query: 710 accagtc 716
|||||||
Sbjct: 508 accagtc 514
>gnl|LJGI|TC57784 similar to UniRef100_UPI000019718F Cluster: sec34-like family
protein; n=1; Arabidopsis thaliana|Rep: sec34-like
family protein - Arabidopsis thaliana, partial (29%)
Length = 798
Score = 58.0 bits (29), Expect = 3e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 163 gggttgcagttgcagttgcagttgcagaa 191
|||||||||||||||||||||||||||||
Sbjct: 1 gggttgcagttgcagttgcagttgcagaa 29
>gnl|LJGI|FS336871 similar to UniRef100_Q8L744 Cluster: At1g73430/T9L24_16; n=1;
Arabidopsis thaliana|Rep: At1g73430/T9L24_16 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 726
Score = 54.0 bits (27), Expect = 5e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 165 gttgcagttgcagttgcagttgcagaa 191
|||||||||||||||||||||||||||
Sbjct: 37 gttgcagttgcagttgcagttgcagaa 63
>gnl|LJGI|TC80555 similar to UniRef100_Q9M0V3 Cluster: DNA damage-binding protein 1a;
n=2; Arabidopsis thaliana|Rep: DNA damage-binding
protein 1a - Arabidopsis thaliana (Mouse-ear cress),
partial (10%)
Length = 467
Score = 54.0 bits (27), Expect = 5e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 159 ggaggggttgcagttgcagttgcagttgcag 189
|||||| ||||||||||||||||||||||||
Sbjct: 242 ggagggcttgcagttgcagttgcagttgcag 272
>gnl|LJGI|TC79996 similar to UniRef100_A7Q0U2 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1087
Score = 54.0 bits (27), Expect = 5e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 165 gttgcagttgcagttgcagttgcagaa 191
|||||||||||||||||||||||||||
Sbjct: 77 gttgcagttgcagttgcagttgcagaa 51