Miyakogusa Predicted Gene
- Lj5g3v2241200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2241200.1 Non Chatacterized Hit- tr|D7KLX6|D7KLX6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,44.9,0.00000000000005,Leucine-rich repeats, typical (most
populate,Leucine-rich repeat, typical subtype; Serine/Threonine
,CUFF.57057.1
(1449 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposa... 341 7e-93
gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 337 1e-91
gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 100 5e-20
gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome... 66 7e-10
gnl|LJGI|TC79340 weakly similar to UniRef100_A7PEG6 Cluster: Chr... 56 6e-07
gnl|LJGI|TC62150 similar to UniRef100_A7PEG6 Cluster: Chromosome... 56 6e-07
>gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposase; n=1; Vibrio
splendidus 12B01|Rep: Transposase - Vibrio splendidus
12B01, partial (9%)
Length = 351
Score = 341 bits (172), Expect = 7e-93
Identities = 187/192 (97%)
Strand = Plus / Minus
Query: 1258 cttgaagtcatatcttttatagataagttggacgtacgtccccctcatcctatacattgt 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 351 cttgaagtcatatcttttatagataagttggacgtacgtccccctcatcctataccttgt 292
Query: 1318 gtttttaaggaggtggtatcaatggcaaggatagttattgcttgcttcactgaaagccca 1377
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 291 gtttttaaggaggtggtatccatggccaggatagttattgcttgcttcactgaaagccca 232
Query: 1378 cgttctcgccctaccatggagcaagtttgcaaggagcttgcaatgtcaaactcttctata 1437
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 231 cgttctcgccctaccctggagccagtttgcaaggagcttgcaatgtcaaactcttctata 172
Query: 1438 atgggttagttt 1449
||||||||||||
Sbjct: 171 atgggttagttt 160
>gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (12%)
Length = 797
Score = 337 bits (170), Expect = 1e-91
Identities = 281/318 (88%)
Strand = Plus / Plus
Query: 897 tgcatttgattggaatatgaggatgaatgtcattaaggatgtagctaatgctttacgcta 956
||||||||| ||||||| |||| |||||||||| || |||||||| | ||||||| ||||
Sbjct: 46 tgcatttgagtggaataagagggtgaatgtcatcaaagatgtagccagtgctttatgcta 105
Query: 957 tatgcatcatgattgctcacctccaattgttcatcgcgacatatccagcaagaatattct 1016
||||| |||||||||||||| || || |||||||| || ||||| ||||||||| ||||
Sbjct: 106 catgcaccatgattgctcaccacctatcgttcatcgagatatatcaagcaagaatgttct 165
Query: 1017 tttggatttagaatatgtggctcatgtctcagacttcggaacagctaagcttcttaatcc 1076
||||||| |||||||||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct: 166 attggattcagaatatgtggctcatatctcagacttcgggacagctaagcttctgaatcc 225
Query: 1077 taattcagcaaattggacctcatttgcaggcacatttggatatgctgctccagaactagc 1136
||||||| | ||||||||| ||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 226 taattcaactaattggaccacatttgcaggcacctttggatacgctgctccagaacttgc 285
Query: 1137 ttacacgatggaagtaaatccgaaatgtgatgtgtacagttttggagtattagcattgga 1196
||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 286 ctacacaatggaagtaaatgagaaatgtgatgtctatagttttggagtattagcattgga 345
Query: 1197 aatactttttggaaagca 1214
| | |||||||||||||
Sbjct: 346 agtgatttttggaaagca 363
Score = 65.9 bits (33), Expect = 7e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 1360 tgcttcactgaaagcccacgttctcgccctaccatggagcaagtttgcaaggagcttgca 1419
||||| ||||| |||||| |||||||||||||||| |||||||| |||||||||||
Sbjct: 504 tgcttgactgagagcccatattctcgccctaccatgaagcaagttgtcaaggagcttgag 563
Query: 1420 atgtcaaactcttctataatgggttagtt 1448
|||||||| || ||| ||||| ||||||
Sbjct: 564 atgtcaaagtcatcttcaatggattagtt 592
>gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (17%)
Length = 866
Score = 99.6 bits (50), Expect = 5e-20
Identities = 197/246 (80%)
Strand = Plus / Plus
Query: 954 ctatatgcatcatgattgctcacctccaattgttcatcgcgacatatccagcaagaatat 1013
||||||||| |||||||| || ||||| || |||| ||||||||||| ||||||||| |
Sbjct: 208 ctatatgcaccatgattgttctcctcctataattcaccgcgacatatcaagcaagaatgt 267
Query: 1014 tcttttggatttagaatatgtggctcatgtctcagacttcggaacagctaagcttcttaa 1073
|||| | ||| | |||||| ||||||||||| || || |||||||| ||| |||| ||
Sbjct: 268 tcttctagatcttcaatatgaagctcatgtctctgattttggaacagcaaagtttctgaa 327
Query: 1074 tcctaattcagcaaattggacctcatttgcaggcacatttggatatgctgctccagaact 1133
||| |||| | ||||||| ||||||||||||| ||||| ||||| |||||||| ||
Sbjct: 328 gcctggttcacatacttggaccgcatttgcaggcacctttggttatgcagctccagagct 387
Query: 1134 agcttacacgatggaagtaaatccgaaatgtgatgtgtacagttttggagtattagcatt 1193
||| | || ||| |||| ||| |||||||||||| || || ||||| || || || ||
Sbjct: 388 cgctcagacaatgcaagtgaatgagaaatgtgatgtatatagctttggggtgtttgcttt 447
Query: 1194 ggaaat 1199
||||||
Sbjct: 448 ggaaat 453
>gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1259
Score = 65.9 bits (33), Expect = 7e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 1089 ttggacctcatttgcaggcacatttggatatgctgctccagaactagcttacacgatgga 1148
|||||| |||||||||||||||| ||| |||||||||||||| || || ||||| |||
Sbjct: 121 ttggacatcatttgcaggcacatatggctatgctgctccagagcttgcatacacactggc 180
Query: 1149 agtaaatccgaaatgtgatgtgtacagttttgg 1181
||| | | |||||||||||||| ||| |||||
Sbjct: 181 agtgactgagaaatgtgatgtgttcagctttgg 213
>gnl|LJGI|TC79340 weakly similar to UniRef100_A7PEG6 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 662
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 953 gctatatgcatcatgattgctcacctccaattgttcatcg 992
|||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 395 gctacatgcatcatgattgctcaccgccagttgttcatcg 434
>gnl|LJGI|TC62150 similar to UniRef100_A7PEG6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1005
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 953 gctatatgcatcatgattgctcacctccaattgttcatcg 992
|||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 18 gctacatgcatcatgattgctcaccgccagttgttcatcg 57