Miyakogusa Predicted Gene
- Lj5g3v2241170.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2241170.2 tr|Q6ZLH4|Q6ZLH4_ORYSJ Os07g0590600 protein
OS=Oryza sativa subsp. japonica GN=OJ1174_G05.19 PE=4
SV,29.41,4e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PPR,P,CUFF.57053.2
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO030377 similar to UniRef100_A7P2U7 Cluster: Chromosom... 1267 0.0
>gnl|LJGI|GO030377 similar to UniRef100_A7P2U7 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 781
Score = 1267 bits (639), Expect = 0.0
Identities = 648/651 (99%)
Strand = Plus / Minus
Query: 1 atgcagcacatgggatgtgaaccagatagagcctcctataatatcttggtagatgcatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atgcagcacatgggatgtgaaccagatagagcctcctataatatcttggtagatgcatat 642
Query: 61 ggcagagcaggttttctaaatgatgccgaagctgtatttgaagacatgaaaagagtggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggcagagcaggttttctaaatgatgccgaagctgtatttgaagacatgaaaagagtggga 582
Query: 121 ataacaccaacaatgaaatcccacatggtacttttatctgccttttcgaaaactggcaat 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 581 ataacaccaacaatgaaatcccacatggtacttttatctgccttttccaaaactggcaat 522
Query: 181 gtgagtaaatgtgaggacattctcaaccaaatgtgcaaatctggcctgaaactagacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtgagtaaatgtgaggacattctcaaccaaatgtgcaaatctggcctgaaactagacact 462
Query: 241 tttgttctaaacagcatgctgaacttgtatggacggttaggccaatttggaaagatggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tttgttctaaacagcatgctgaacttgtatggacggttaggccaatttggaaagatggaa 402
Query: 301 gaagttttgacagtgatggaaaatggatcatgtgaagctgatattagcacatacaatatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaagttttgacagtgatggaaaatggatcatgtgaagctgatattagcacatacaatatc 342
Query: 361 ttgataaataggtatggtcaagctggattcattgacaaaatggaaggcctatttcaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 341 ttgataaataggtatggtcaagctggattcattgacaaaatggaaggcctatttcgattg 282
Query: 421 ttgcatagtaaaggtttgaaacctgatgtggtgacttggacttcacgtattggagcatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttgcatagtaaaggtttgaaacctgatgtggtgacttggacttcacgtattggagcatac 222
Query: 481 tctaaaaagaagctttatgtaaggtgcttagaaatatttgaagaaatgattgattctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tctaaaaagaagctttatgtaaggtgcttagaaatatttgaagaaatgattgattctggt 162
Query: 541 tgctaccctgatggaggaacagctaaggtgctccttgcagcatgctccaatgaagatcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 161 tgctaccctgatggaggaacagctaaggtgctccttgcagcatgctccaatgaagctcag 102
Query: 601 actgagcaggttactactgtgattagaacaatggacaaggatatcaaaact 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 actgagcaggttactactgtgattagaacaatggacaaggatatcaaaact 51