Miyakogusa Predicted Gene
- Lj5g3v2241100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2241100.1 Non Chatacterized Hit- tr|F6HRC9|F6HRC9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.17,4e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PROTEIN_KINASE_DOM,Protein kinase, catalytic domain,gene.g63314.t1.1
(1983 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 329 4e-89
gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 101 2e-20
gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposa... 72 1e-11
gnl|LJGI|TC79340 weakly similar to UniRef100_A7PEG6 Cluster: Chr... 58 2e-07
gnl|LJGI|TC62150 similar to UniRef100_A7PEG6 Cluster: Chromosome... 58 2e-07
>gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (12%)
Length = 797
Score = 329 bits (166), Expect = 4e-89
Identities = 298/342 (87%)
Strand = Plus / Plus
Query: 1455 agatgatgaacaagcaactgcatttgattggaataggaggatgaatgtcattaaggatat 1514
||||| |||||||||| ||||||||| ||||||| |||| |||||||||| || ||| |
Sbjct: 28 agatggtgaacaagcaggtgcatttgagtggaataagagggtgaatgtcatcaaagatgt 87
Query: 1515 agctaatgctttatgctatatgcatcatgattgctcacctccaattgttcatcgctacat 1574
||| | |||||||||||| ||||| |||||||||||||| || || |||||||| | ||
Sbjct: 88 agccagtgctttatgctacatgcaccatgattgctcaccacctatcgttcatcgagatat 147
Query: 1575 atccagcaagaatgttctttgggatttagattatgtggctcatgtctcagactttggaac 1634
||| |||||||||||||| | ||||| ||| |||||||||||| |||||||||| || ||
Sbjct: 148 atcaagcaagaatgttctattggattcagaatatgtggctcatatctcagacttcgggac 207
Query: 1635 agctaagcttcttaatcctaattcaacaaactggacctcattcgcaggcacctttggata 1694
|||||||||||| |||||||||||||| || |||||| |||| |||||||||||||||||
Sbjct: 208 agctaagcttctgaatcctaattcaactaattggaccacatttgcaggcacctttggata 267
Query: 1695 tactgctccagaactagcttacacaatgaacgtgaatgagaaatgcgatgtgtatagttt 1754
||||||||||||| || ||||||||| | || ||||||||||| ||||| ||||||||
Sbjct: 268 cgctgctccagaacttgcctacacaatggaagtaaatgagaaatgtgatgtctatagttt 327
Query: 1755 tggagtattagcattggaaatactttttggaaagcaccctgg 1796
||||||||||||||||||| | |||||||||||||||||||
Sbjct: 328 tggagtattagcattggaagtgatttttggaaagcaccctgg 369
>gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (17%)
Length = 866
Score = 101 bits (51), Expect = 2e-20
Identities = 200/247 (80%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1530 ctatatgcatcatgattgctcacctccaattgttcatcgctacatatccagcaagaatgt 1589
||||||||| |||||||| || ||||| || |||| ||| ||||||| |||||||||||
Sbjct: 208 ctatatgcaccatgattgttctcctcctataattcaccgcgacatatcaagcaagaatgt 267
Query: 1590 tctttgggatttagattatgtggctcatgtctcagactttggaacagctaagcttcttaa 1649
|||| ||| | | |||| ||||||||||| || ||||||||||| ||| |||| ||
Sbjct: 268 tcttctagatcttcaatatgaagctcatgtctctgattttggaacagcaaagtttctgaa 327
Query: 1650 tcctaattcaacaaac-tggacctcattcgcaggcacctttggatatactgctccagaac 1708
||| ||| ||| || |||||| |||| |||||||||||||| ||| | |||||||| |
Sbjct: 328 gcctggttc-acatacttggaccgcatttgcaggcacctttggttatgcagctccagagc 386
Query: 1709 tagcttacacaatgaacgtgaatgagaaatgcgatgtgtatagttttggagtattagcat 1768
| ||| | |||||| | |||||||||||||| ||||| ||||| ||||| || || || |
Sbjct: 387 tcgctcagacaatgcaagtgaatgagaaatgtgatgtatatagctttggggtgtttgctt 446
Query: 1769 tggaaat 1775
|||||||
Sbjct: 447 tggaaat 453
>gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposase; n=1; Vibrio
splendidus 12B01|Rep: Transposase - Vibrio splendidus
12B01, partial (9%)
Length = 351
Score = 71.9 bits (36), Expect = 1e-11
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 1846 tctttgatagataagttggacttacgtctccctcaccctataaatcctgttgtcaaggag 1905
||||| ||||||||||||||| |||||| |||||| |||||| | |||| | ||||||
Sbjct: 339 tcttttatagataagttggacgtacgtccccctcatcctataccttgtgtttttaaggag 280
Query: 1906 gtgatatcaatgacaaaaatagttgttgcctgcctaacggaaagcccacgctctcgccct 1965
||| |||| ||| | | |||||| |||| ||| | || ||||||||||| |||||||||
Sbjct: 279 gtggtatccatggccaggatagttattgcttgcttcactgaaagcccacgttctcgccct 220
Query: 1966 accatgga 1973
||| ||||
Sbjct: 219 accctgga 212
>gnl|LJGI|TC79340 weakly similar to UniRef100_A7PEG6 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 662
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1528 tgctatatgcatcatgattgctcacctccaattgttcatcg 1568
||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 394 tgctacatgcatcatgattgctcaccgccagttgttcatcg 434
>gnl|LJGI|TC62150 similar to UniRef100_A7PEG6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1005
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1528 tgctatatgcatcatgattgctcacctccaattgttcatcg 1568
||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 17 tgctacatgcatcatgattgctcaccgccagttgttcatcg 57