Miyakogusa Predicted Gene
- Lj5g3v2241010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2241010.1 Non Chatacterized Hit- tr|I1KKM1|I1KKM1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,37.36,0.000000000006,zinc finger,Zinc finger, C2H2-like;
SUBFAMILY NOT NAMED,NULL; SERINE/THREONINE-PROTEIN KINASE
RIO,NU,CUFF.57013.1
(1824 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74949 similar to UniRef100_A7QBW3 Cluster: Chromosome... 1624 0.0
gnl|LJGI|TC66141 similar to UniRef100_Q5UDB7 Cluster: INDETERMIN... 494 e-138
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 137 3e-31
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 131 2e-29
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 125 1e-27
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 115 1e-24
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 101 2e-20
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 98 2e-19
gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosom... 82 1e-14
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 68 2e-10
gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome... 56 8e-07
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 54 3e-06
>gnl|LJGI|TC74949 similar to UniRef100_A7QBW3 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 1403
Score = 1624 bits (819), Expect = 0.0
Identities = 819/819 (100%)
Strand = Plus / Plus
Query: 1006 catcacaatcacaacagcaattctccatcaggtggtgccaacaacaacagcctcttcaac 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 catcacaatcacaacagcaattctccatcaggtggtgccaacaacaacagcctcttcaac 281
Query: 1066 cttccattcctttcaagcaacaacagcaccaacagcagcaacacctccttctcggaccac 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cttccattcctttcaagcaacaacagcaccaacagcagcaacacctccttctcggaccac 341
Query: 1126 ttcaatgaaaatggtagtgtcaacgaccaagccaccaatttcttcaccggcaacgtgatg 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttcaatgaaaatggtagtgtcaacgaccaagccaccaatttcttcaccggcaacgtgatg 401
Query: 1186 ggtggcggtggcggcggcggtagtcatcagcagcaccaccaaacaacagcaacaacctcc 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggtggcggtggcggcggcggtagtcatcagcagcaccaccaaacaacagcaacaacctcc 461
Query: 1246 gctgctccttctctgttcagcacatccctccaagccaacaacagtgcaatggctcacatg 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gctgctccttctctgttcagcacatccctccaagccaacaacagtgcaatggctcacatg 521
Query: 1306 tctgcaactgcactccttcagaaagctgctcaattgggtacaacttcaagcaacagcacc 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tctgcaactgcactccttcagaaagctgctcaattgggtacaacttcaagcaacagcacc 581
Query: 1366 gcttctctgttgaaaagctttggaagctcttcctctagcagtgcacccaaaccaatggct 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gcttctctgttgaaaagctttggaagctcttcctctagcagtgcacccaaaccaatggct 641
Query: 1426 ggtgctgctgcaaactatggcggcgtcggcgtcggtatgttcaacgagcagaacaacctg 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggtgctgctgcaaactatggcggcgtcggcgtcggtatgttcaacgagcagaacaacctg 701
Query: 1486 caggacttgatgaactcgtttgctgcggcaagtggcggcggcggccataacaatgtttcc 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 caggacttgatgaactcgtttgctgcggcaagtggcggcggcggccataacaatgtttcc 761
Query: 1546 tccatgtttgaaactggggggtttgaggcttatgatcgtgcaggtggtgtgagtagggat 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tccatgtttgaaactggggggtttgaggcttatgatcgtgcaggtggtgtgagtagggat 821
Query: 1606 cagcagaagatgcaggcggcgatgagcattggagggtctgataggctgagtactcgtgat 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 cagcagaagatgcaggcggcgatgagcattggagggtctgataggctgagtactcgtgat 881
Query: 1666 tttcttggtgttggtcagattgtgagaagcatgagtggtggtggacaaagagaacagcaa 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 tttcttggtgttggtcagattgtgagaagcatgagtggtggtggacaaagagaacagcaa 941
Query: 1726 catgcttttaatgctttggaggcagagagaaatgctgctgctgctacagctgcgccgtca 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 catgcttttaatgctttggaggcagagagaaatgctgctgctgctacagctgcgccgtca 1001
Query: 1786 gggcaatcttttggaggtggtggagggaattttcagtga 1824
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gggcaatcttttggaggtggtggagggaattttcagtga 1040
>gnl|LJGI|TC66141 similar to UniRef100_Q5UDB7 Cluster: INDETERMINATE-related protein
7; n=1; Zea mays|Rep: INDETERMINATE-related protein 7 -
Zea mays (Maize), partial (9%)
Length = 725
Score = 494 bits (249), Expect = e-138
Identities = 263/270 (97%)
Strand = Plus / Plus
Query: 1 atggcagcatcgtcttcctcagcatcactctttggattcagagaagaggataatcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atggcagcatcgtcttcctcagcatcactctttggattcagagaagaggataatcagatg 515
Query: 61 aaccaacagcagcaacattccctggtggcagcagcaccatcctcttcagcaactccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaccaacagcagcaacattccctggtggcagcagcaccatcctcttcagcaactccatct 575
Query: 121 gcaccaccaccccagaagnnnnnnngaaaccaacctggaacaccaaatccagatgcagag 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 576 gcaccaccaccccagaagaaaaaaagaaaccaacctggaacaccaaatccagatgcagag 635
Query: 181 gtgatagcactatctcccaagaccctaatggcaacaaacaggttcatatgtgaggtgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gtgatagcactatctcccaagaccctaatggcaacaaacaggttcatatgtgaggtgtgc 695
Query: 241 aacaaagggttccaaagggagcaaaacttg 270
||||||||||||||||||||||||||||||
Sbjct: 696 aacaaagggttccaaagggagcaaaacttg 725
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 137 bits (69), Expect = 3e-31
Identities = 160/189 (84%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 436 catggtgagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatctgat 495
|||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 18 catggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttcaatcagac 77
Query: 496 tggaaagctcattctaagacttgtggcaccagggaatacagatgtgactgtggcactctc 555
||||||||||| || || || ||||| || || |||||||||||||||||||| | |
Sbjct: 78 tggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgg-aggccg 136
Query: 556 ttctccaggagagacagtttcatcacccacagggccttctgtgatgcattggcacaagag 615
| |||||| |||| |||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct: 137 ctgggcaggagggacaatttcataacccacagagccttctgtgatgcattagcagaggag 196
Query: 616 agtgcaaga 624
|||||||||
Sbjct: 197 agtgcaaga 205
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 131 bits (66), Expect = 2e-29
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 433 aaacatggtgagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatct 492
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 365 aaacatggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgctgttcattcc 424
Query: 493 gattggaaagctcattctaagacttgtggcaccagggaatacagatgtgactgtggcact 552
|||||||| || ||| | |||| |||||| || || || |||| ||||||||||||||
Sbjct: 425 gattggaaggcccatgccaagatttgtgggactagagagtacaagtgtgactgtggcaca 484
Query: 553 ctcttctccaggagagacagtttcat 578
|| |||||||||| ||||| |||||
Sbjct: 485 cttttctccaggaaggacagcttcat 510
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 125 bits (63), Expect = 1e-27
Identities = 198/243 (81%)
Strand = Plus / Plus
Query: 382 ccttcaagggctctgggcgacctcacagggatcaagaagcattactctcgcaaacatggt 441
||||| || ||| |||| || ||||| ||||| |||||||||| || | ||||||||
Sbjct: 371 ccttctagagctttgggtgatctcacggggattaagaagcatttctgcagaaaacatggc 430
Query: 442 gagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatctgattggaaa 501
|||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 431 gagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcggattggaaa 490
Query: 502 gctcattctaagacttgtggcaccagggaatacagatgtgactgtggcactctcttctcc 561
||||| || |||| ||| || ||||| || || | ||| || ||||| ||| | || ||
Sbjct: 491 gctcactccaagatttgcggtaccagagagtataaatgcgattgtggaactttgttttca 550
Query: 562 aggagagacagtttcatcacccacagggccttctgtgatgcattggcacaagagagtgca 621
||||| || || |||||||| || ||||| || |||||||| || ||| | || ||||||
Sbjct: 551 aggagggatagcttcatcacgcatagggcgttttgtgatgcgttagcagaggaaagtgca 610
Query: 622 aga 624
|||
Sbjct: 611 aga 613
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 115 bits (58), Expect = 1e-24
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 439 ggtgagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatctgattgg 498
||||||||||||||||||||||| ||||||||||||||||| || || | ||| ||||||
Sbjct: 234 ggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgcagtcccatcagattgg 175
Query: 499 aaagctcattctaagacttgtggcaccagggaatacagatgtgactgtggcactctcttc 558
|||||||| | | || || ||||||||||| |||| |||||||||||||| ||||||
Sbjct: 174 aaagctcacacccaaacatgcggcaccagggagtacaagtgtgactgtggcaccctcttc 115
Query: 559 tccagg 564
||||||
Sbjct: 114 tccagg 109
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 101 bits (51), Expect = 2e-20
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 442 gagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatctgattggaaa 501
||||| || ||||| |||||||||||||||||||| || |||||||||||||| |||| |
Sbjct: 748 gagaaaaaatggaaatgtgacaagtgctccaagaagtacgctgttcaatctgactggaga 807
Query: 502 gctcattctaagacttgtggcaccagggaatacagatgtgactgtggcactctcttctcc 561
|| || || || | |||||||| | |||||| | ||||||||||| || |||| |||
Sbjct: 808 gcacactccaaaatatgtggcacgaaggaatataagtgtgactgtggaaccatcttttcc 867
Query: 562 aggagagacagtttcatcacccacagggccttctg 596
|| ||||| ||||||||||||||||| || |||||
Sbjct: 868 agaagagatagtttcatcacccacagagctttctg 902
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 97.6 bits (49), Expect = 2e-19
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 439 ggtgagaagaagtggaagtgtgacaagtgctccaagaaatatgctgttcaatctgattgg 498
||||||||||||||||| || || || ||||||||||||||||| |||||||||||||||
Sbjct: 491 ggtgagaagaagtggaaatgcgagaaatgctccaagaaatatgcagttcaatctgattgg 550
Query: 499 aaagctcattctaagacttgtggcaccagggaatacagatgtgactgtggcac 551
|||||||| || ||| ||| || ||||| || || | ||||||||| |||||
Sbjct: 551 aaagctcactccaaggtttgcggtaccagagagtataaatgtgactgcggcac 603
>gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 618
Score = 81.8 bits (41), Expect = 1e-14
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 529 gaatacagatgtgactgtggcactctcttctccaggagagacagtttcatcacccacagg 588
||||| |||||||| |||||||| |||||||| ||| | || ||||||||||| || |||
Sbjct: 290 gaatatagatgtgattgtggcaccctcttctcaaggcgtgatagtttcatcactcatagg 349
Query: 589 gccttctgtgatgcattggcacaagagagtgcaagac 625
|||||||||||||| | | |||||| ||||||||||
Sbjct: 350 gccttctgtgatgccctagtacaagaaagtgcaagac 386
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 208 atggcaacaaacaggttcatatgtgaggtgtgcaacaaagggttccaaag 257
|||||||||||||||||| |||||||| | ||||||||||| ||||||||
Sbjct: 698 atggcaacaaacaggttcttatgtgagatctgcaacaaaggattccaaag 747
>gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 974
Score = 56.0 bits (28), Expect = 8e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1298 ctcacatgtctgcaactgcactccttcagaaagctgctcaattgggtacaac 1349
|||||||||| || |||||| | |||||||||||||||||| ||||| ||||
Sbjct: 218 ctcacatgtcagccactgcattgcttcagaaagctgctcaaatgggttcaac 269
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 54.0 bits (27), Expect = 3e-06
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 154 cctggaacaccaaatccagatgcagaggtgatagcactatctcccaagaccctaatggca 213
||||||| ||| ||||||| ||||||||||| || || || || ||||| ||||||||
Sbjct: 226 cctggaatgccagatccagaagcagaggtgattgctctgtcaccgaagactctaatggcg 285
Query: 214 acaaacaggttcatatgtgaggtgtgcaacaaagggttccaaaggga 260
|| ||||| ||| |||| || | |||||||||||||| || |||||
Sbjct: 286 acgaacagattcgtatgcgaaatttgcaacaaagggtttcagaggga 332