Miyakogusa Predicted Gene
- Lj5g3v2240970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2240970.1 tr|G7ICI8|G7ICI8_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_1g039310 PE=4
SV=1,65.66,0,seg,NULL; LRR_8,NULL; Pkinase,Protein kinase, catalytic
domain; LRR_1,Leucine-rich repeat; LRRNT_2,L,CUFF.57008.1
(3447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338071 weakly similar to UniRef100_A7QCQ6 Cluster: Ch... 361 2e-98
gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 337 3e-91
gnl|LJGI|DC600151 weakly similar to UniRef100_Q0PY41 Cluster: Le... 297 2e-79
gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposa... 96 2e-18
gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 92 3e-17
gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome... 88 4e-16
gnl|LJGI|FS321801 weakly similar to UniRef100_A7PFM0 Cluster: Ch... 64 6e-09
>gnl|LJGI|FS338071 weakly similar to UniRef100_A7QCQ6 Cluster: Chromosome chr12
scaffold_78, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_78, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 762
Score = 361 bits (182), Expect = 2e-98
Identities = 280/312 (89%), Gaps = 3/312 (0%)
Strand = Plus / Plus
Query: 86 aggaggcagaagctctgttgaagtggaaagccagccttgacaaccaaagcca---tgtct 142
|||||||||||||||| ||||||||||||||||||||||||||||||| ||| | |
Sbjct: 192 aggaggcagaagctctcttgaagtggaaagccagccttgacaaccaaacccagactttgg 251
Query: 143 tgctctcttcatggacaagaaacagtactactccatgcaattggctgggaattcgatgtg 202
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 252 tgctctcttcatggacaagtaacagtactactccatgcaattggctgggaattcaatgtg 311
Query: 203 agtacaaatccatctccaagctgaatcttacaaatgctggactaagaggtacacttcaaa 262
||| |||||||||||| | |||||||||||||||| |||||| | ||||||||||||||
Sbjct: 312 agtccaaatccatctctatcctgaatcttacaaatgttggactcaaaggtacacttcaaa 371
Query: 263 gtctcaacttgtcatcactttcaaaactcgacaccatagttttaagcagcaattccttgt 322
|||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||
Sbjct: 372 gtctcaacttgtcatcacttccaaaactccgcaccatagatttaagtagcaattccttgt 431
Query: 323 atggagttatacctcaccactttgggttcatgtccaacctgcacactcttgatttgtcca 382
|||||||||||||||||||||||||||| |||| |||| || | |||| |||||||| |
Sbjct: 432 atggagttatacctcaccactttgggttgatgtacaacttggaatctctggatttgtcta 491
Query: 383 ctaacaaactct 394
|||||| ||||
Sbjct: 492 gtaacaacctct 503
Score = 79.8 bits (40), Expect = 1e-13
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1310 gtgaaaataaattttctggcccaattccttccaccattggaaactggacaaagatcaaag 1369
||||||||||| |||||||||||||||||||||| |||||||||| || ||||||| ||
Sbjct: 633 gtgaaaataaactttctggcccaattccttccacaattggaaacttgaacaagatcagag 692
Query: 1370 tatt 1373
||||
Sbjct: 693 tatt 696
>gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (12%)
Length = 797
Score = 337 bits (170), Expect = 3e-91
Identities = 278/314 (88%)
Strand = Plus / Plus
Query: 2899 tggaataggaggatgaatgtcattaaggatgtagctaatgctttatgctatatgcatcat 2958
||||||| |||| |||||||||| || |||||||| | |||||||||||| ||||| |||
Sbjct: 56 tggaataagagggtgaatgtcatcaaagatgtagccagtgctttatgctacatgcaccat 115
Query: 2959 gattgctcacctcccattgttcatcgcgacatatccagcaagaatgttcttttgaattca 3018
||||||||||| || || |||||||| || ||||| |||||||||||||| ||| |||||
Sbjct: 116 gattgctcaccacctatcgttcatcgagatatatcaagcaagaatgttctattggattca 175
Query: 3019 gaatatgtggctcatgtctcagactttggaacagctaaactacttgatcctaattcatca 3078
||||||||||||||| |||||||||| || |||||||| || || ||||||||||| |
Sbjct: 176 gaatatgtggctcatatctcagacttcgggacagctaagcttctgaatcctaattcaact 235
Query: 3079 aattggacctcatttgcaggcactttcggatatgctgctccagaactagcttacacaatg 3138
||||||||| ||||||||||||| || ||||| |||||||||||||| || |||||||||
Sbjct: 236 aattggaccacatttgcaggcacctttggatacgctgctccagaacttgcctacacaatg 295
Query: 3139 gcagtaaatgagaaatgtgatgtgtatagttttggagtattagcattggaaattcttttt 3198
| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 296 gaagtaaatgagaaatgtgatgtctatagttttggagtattagcattggaagtgattttt 355
Query: 3199 ggaaagcaccctgg 3212
||||||||||||||
Sbjct: 356 ggaaagcaccctgg 369
Score = 54.0 bits (27), Expect = 6e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 3373 tctcgcccaaccatggagcaaatttgtaaggagcttgtaatgtcaaactcatcttcaatg 3432
|||||||| |||||| ||||| || |||||||||| |||||||| ||||||||||||
Sbjct: 525 tctcgccctaccatgaagcaagttgtcaaggagcttgagatgtcaaagtcatcttcaatg 584
Query: 3433 gat 3435
|||
Sbjct: 585 gat 587
>gnl|LJGI|DC600151 weakly similar to UniRef100_Q0PY41 Cluster: Leucine-rich repeat
family protein; n=1; Solanum lycopersicum|Rep:
Leucine-rich repeat family protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(10%)
Length = 486
Score = 297 bits (150), Expect = 2e-79
Identities = 386/463 (83%), Gaps = 15/463 (3%)
Strand = Plus / Plus
Query: 11 caatgaagcttgttctaccattaatgctcttttgtgcccttgcattcatggtcatcactt 70
||||||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||||
Sbjct: 33 caatgaagcttcttctaccattaatgctcttctatgcctttgcattaatggtcatcactg 92
Query: 71 cactacctcatcaggaggaggcagaagctctgttgaagtggaaagccagccttgacaacc 130
|| | ||||||||| ||| ||||| || | |||||||||||||||||||||||
Sbjct: 93 cagg---taatcaggagg---caggtgctctcttaaggtggaaagccagccttgacaacc 146
Query: 131 aaagccatgtcttgctctcttcatggacaagaaacagtactactccatgcaattggctgg 190
||||||| ||||| |||||||||||| |||||||||| |||||| ||||||||||
Sbjct: 147 aaagcca------gctcttttcatggacaagtaacagtactagtccatgtaattggctgg 200
Query: 191 gaattcgatgtgagta---caaatccatctccaagctgaatcttacaaatgctggactaa 247
|||||| |||||||| |||||| ||||||| |||||||||||||| || |||||| |
Sbjct: 201 gaattcaatgtgagtcgtccaaatctatctccatgctgaatcttacaagtgttggactca 260
Query: 248 gaggtacacttcaaagtctcaacttgtcatcactttcaaaactcgacaccatagttttaa 307
||||||||||||||| ||||||||||||||| || |||||||| ||| ||||| | |||
Sbjct: 261 aaggtacacttcaaagcctcaacttgtcatcatttccaaaactctacagcatagatctaa 320
Query: 308 gcagcaattccttgtatggagttatacctcaccactttgggttcatgtccaacctgcaca 367
||| ||| ||||||||||||||||| |||| ||| ||||||| |||||||||||| | |
Sbjct: 321 gcatcaactccttgtatggagttattcctcgccaacttgggttgatgtccaacctggaaa 380
Query: 368 ctcttgatttgtccactaacaaactctccggcaccattcccaatagcattggtaatcttt 427
||||||||||||| ||||| | ||||| || | |||||| |||||||| || ||||
Sbjct: 381 ctcttgatttgtcagctaactacctctctggtatcattccttccagcattggcaaccttt 440
Query: 428 ccaaactctcttaccttgatctcagttacaatgatctctctgg 470
||||||||| || ||| ||||| || | ||||||||||||||
Sbjct: 441 tcaaactctcgtatctttatctcggtcaaaatgatctctctgg 483
>gnl|LJGI|BP085954 similar to UniRef100_A3UMF4 Cluster: Transposase; n=1; Vibrio
splendidus 12B01|Rep: Transposase - Vibrio splendidus
12B01, partial (9%)
Length = 351
Score = 95.6 bits (48), Expect = 2e-18
Identities = 123/148 (83%)
Strand = Plus / Minus
Query: 3275 agttggacctacgtctccctcatccattaaatcatgtgtttaaggaggtggtatcattga 3334
|||||||| |||||| ||||||||| || | ||| ||||||||||||||||| ||
Sbjct: 326 agttggacgtacgtccccctcatcctataccttgtgtttttaaggaggtggtatccatgg 267
Query: 3335 caaggattgttgttacttgcttaattgaaagcccacgctctcgcccaaccatggagcaaa 3394
| ||||| ||| || ||||||| | |||||||||||| |||||||| ||| |||||| |
Sbjct: 266 ccaggatagttattgcttgcttcactgaaagcccacgttctcgccctaccctggagccag 207
Query: 3395 tttgtaaggagcttgtaatgtcaaactc 3422
|||| |||||||||| ||||||||||||
Sbjct: 206 tttgcaaggagcttgcaatgtcaaactc 179
>gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (17%)
Length = 866
Score = 91.7 bits (46), Expect = 3e-17
Identities = 196/246 (79%)
Strand = Plus / Plus
Query: 2946 ctatatgcatcatgattgctcacctcccattgttcatcgcgacatatccagcaagaatgt 3005
||||||||| |||||||| || ||||| || |||| ||||||||||| |||||||||||
Sbjct: 208 ctatatgcaccatgattgttctcctcctataattcaccgcgacatatcaagcaagaatgt 267
Query: 3006 tcttttgaattcagaatatgtggctcatgtctcagactttggaacagctaaactacttga 3065
|||| | || |||||| ||||||||||| || ||||||||||| || | || |
Sbjct: 268 tcttctagatcttcaatatgaagctcatgtctctgattttggaacagcaaagtttctgaa 327
Query: 3066 tcctaattcatcaaattggacctcatttgcaggcactttcggatatgctgctccagaact 3125
||| |||| | ||||||| ||||||||||||| || || ||||| |||||||| ||
Sbjct: 328 gcctggttcacatacttggaccgcatttgcaggcacctttggttatgcagctccagagct 387
Query: 3126 agcttacacaatggcagtaaatgagaaatgtgatgtgtatagttttggagtattagcatt 3185
||| | |||||| ||| ||||||||||||||||| ||||| ||||| || || || ||
Sbjct: 388 cgctcagacaatgcaagtgaatgagaaatgtgatgtatatagctttggggtgtttgcttt 447
Query: 3186 ggaaat 3191
||||||
Sbjct: 448 ggaaat 453
>gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1259
Score = 87.7 bits (44), Expect = 4e-16
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 3081 ttggacctcatttgcaggcactttcggatatgctgctccagaactagcttacacaatggc 3140
|||||| |||||||||||||| | || |||||||||||||| || || |||||| ||||
Sbjct: 121 ttggacatcatttgcaggcacatatggctatgctgctccagagcttgcatacacactggc 180
Query: 3141 agtaaatgagaaatgtgatgtgtatagttttggagtattagcattggaaattctttttgg 3200
||| | ||||||||||||||||| || ||||| || || ||||| || ||||| ||
Sbjct: 181 agtgactgagaaatgtgatgtgttcagctttggtgttttggcatttgagattctcacagg 240
Query: 3201 aaagcaccctggtgat 3216
||||||||||||||||
Sbjct: 241 aaagcaccctggtgat 256
>gnl|LJGI|FS321801 weakly similar to UniRef100_A7PFM0 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 698
Score = 63.9 bits (32), Expect = 6e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 105 gaagtggaaagccagccttgacaaccaaagccatgtcttgctctcttcatgg 156
||||||||||||||||||||| ||||||||||| | ||||| |||||||||
Sbjct: 83 gaagtggaaagccagccttgagaaccaaagccaagctttgctatcttcatgg 134