Miyakogusa Predicted Gene
- Lj5g3v2240960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2240960.1 Non Chatacterized Hit- tr|I1NFB9|I1NFB9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55718 PE,92.38,0,no
description,Ribosomal protein S5 domain 2-type fold, subgroup; no
description,NULL; mevDPdecarb: ,CUFF.57017.1
(1263 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63966 similar to UniRef100_Q09RL4 Cluster: Mevalonate... 918 0.0
gnl|LJGI|TC62811 similar to UniRef100_A8WBX7 Cluster: Mevalonate... 835 0.0
gnl|LJGI|DC596907 homologue to UniRef100_Q944G0 Cluster: Mevalon... 400 e-111
gnl|LJGI|AV770398 similar to UniRef100_A8WBX7 Cluster: Mevalonat... 307 9e-83
>gnl|LJGI|TC63966 similar to UniRef100_Q09RL4 Cluster: Mevalonate disphosphate
decarboxylase; n=1; Arnebia euchroma|Rep: Mevalonate
disphosphate decarboxylase - Arnebia euchroma, partial
(36%)
Length = 771
Score = 918 bits (463), Expect = 0.0
Identities = 477/479 (99%), Gaps = 2/479 (0%)
Strand = Plus / Plus
Query: 1 atggcgggtgagtcgcagaattgggtgttgatggtgactgctcagacacccaccaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atggcgggtgagtcgcagaattgggtgttgatggtgactgctcagacacccaccaacatt 350
Query: 61 gctgtcatcaagtattggggtaagagagatgaaaccctaatcttacccgtcaatgatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gctgtcatcaagtattggggtaagagagatgaaaccctaatcttacccgtcaatgatagc 410
Query: 121 atcagtgttactcttgatccaaatcatctctgcactaccaccaccgttgctgtcagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atcagtgttactcttgatccaaatcatctctgcactaccaccaccgttgctgtcagcccc 470
Query: 181 accttccaccaagatcggatgtggctcaatggcaaggagattgctctttctgggggcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 accttccaccaagatcggatgtggctcaatggcaaggagattgctctttctgggggcagg 530
Query: 241 ttccagagctgtttaagggagatccgtgctcgtgcttgtgatgttgacgataagaaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttccagagctgtttaagggagatccgtgctcgtgcttgtgatgttgacgataagaaaaag 590
Query: 301 ggggttaagatcacgaaggaggattggggtaaattgcacgtgcacattgcttcattcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggggttaagatcacgaaggaggattggggtaaattgcacgtgcacattgcttcattcaac 650
Query: 361 aacttccctactgcagctggactggcttcttctgctgcgggttttgcctgtcttgtttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aacttccctactgcagctggactggcttcttctgctgcgggttttgcctgtcttgtttat 710
Query: 421 gcccttgggaagctaatgaatgtcaaagaagatgaaagccagctatctgctattgcaag 479
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 711 gcccttgggaagctaatgaatgtcaaag-agatgaaag-cagctatctgctattgcaag 767
>gnl|LJGI|TC62811 similar to UniRef100_A8WBX7 Cluster: Mevalonate disphosphate
decarboxylase; n=1; Solanum lycopersicum|Rep: Mevalonate
disphosphate decarboxylase - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (33%)
Length = 729
Score = 835 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Plus
Query: 843 attttacatgaatgatacatcccataggataattagcatcattgaaaagtggaaccgctc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttacatgaatgatacatcccataggataattagcatcattgaaaagtggaaccgctc 60
Query: 903 ggaagaagctccccaggtagcttatacatttgatgcggggccaaatgctgttctaattgc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaagaagctccccaggtagcttatacatttgatgcggggccaaatgctgttctaattgc 120
Query: 963 tcgcaataggcaagctgcggcccttttgattcagaggctgctttactacttccctccaaa 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgcaataggcaagctgcggcccttttgattcagaggctgctttactacttccctccaaa 180
Query: 1023 ttcagatgacctcaacagttatattattggtgacaagtcaattgcaaaagatgctgggat 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagatgacctcaacagttatattattggtgacaagtcaattgcaaaagatgctgggat 240
Query: 1083 caatggaatttctgatgtagaagctttgccacctcctccagaaattaaagacaatattcc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caatggaatttctgatgtagaagctttgccacctcctccagaaattaaagacaatattcc 300
Query: 1143 atcacaaaaatacaagggggatgtcaattacttcatatgtaccagacctggaagggggcc 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcacaaaaatacaagggggatgtcaattacttcatatgtaccagacctggaagggggcc 360
Query: 1203 tgttttgctatctgatgaaaatcaagctcttctcaatggtgaaaatgggcttcccaagtg 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgttttgctatctgatgaaaatcaagctcttctcaatggtgaaaatgggcttcccaagtg 420
Query: 1263 a 1263
|
Sbjct: 421 a 421
>gnl|LJGI|DC596907 homologue to UniRef100_Q944G0 Cluster: Mevalonate disphosphate
decarboxylase; n=1; Hevea brasiliensis|Rep: Mevalonate
disphosphate decarboxylase - Hevea brasiliensis (Para
rubber tree), partial (14%)
Length = 560
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 1 atggcgggtgagtcgcagaattgggtgttgatggtgactgctcagacacccaccaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atggcgggtgagtcgcagaattgggtgttgatggtgactgctcagacacccaccaacatt 418
Query: 61 gctgtcatcaagtattggggtaagagagatgaaaccctaatcttacccgtcaatgatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctgtcatcaagtattggggtaagagagatgaaaccctaatcttacccgtcaatgatagc 478
Query: 121 atcagtgttactcttgatccaaatcatctctgcactaccaccaccgttgctgtcagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atcagtgttactcttgatccaaatcatctctgcactaccaccaccgttgctgtcagcccc 538
Query: 181 accttccaccaagatcggatgt 202
||||||||||||||||||||||
Sbjct: 539 accttccaccaagatcggatgt 560
>gnl|LJGI|AV770398 similar to UniRef100_A8WBX7 Cluster: Mevalonate disphosphate
decarboxylase; n=1; Solanum lycopersicum|Rep: Mevalonate
disphosphate decarboxylase - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (15%)
Length = 559
Score = 307 bits (155), Expect = 9e-83
Identities = 226/248 (91%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 1018 ccaaattcagatgacctcaacagttatattattggtgacaagtcaattgcaaaagatgct 1077
|||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||
Sbjct: 419 ccaaattcagatgacctcgaccgttatattattggtgacaagtccattgcaaaagatgct 360
Query: 1078 gggatcaatggaatttctgatgtagaagctttgccacctcctccagaaattaaagacaat 1137
|||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 359 gggatcgatggaatttcttatgtagaagctttgccacctcctccagccactaaagacaat 300
Query: 1138 attccatcacaaaaatacaagggggat--gtcaattacttcatatgtaccagacctggaa 1195
|||||||||| | ||| || |||| |||||||||||||||||||||||||||||||
Sbjct: 299 attccatcacccacatataa---ggatccgtcaattacttcatatgtaccagacctggaa 243
Query: 1196 gggggcctgttttgctatctgatgaaaatcaagctcttctcaatggtgaaaatgggcttc 1255
||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 242 gggggcctgttctgctacctggtgaaaatcaagctcttctctatggtgaaaatgggcttc 183
Query: 1256 ccaagtga 1263
|| |||||
Sbjct: 182 cccagtga 175