Miyakogusa Predicted Gene
- Lj5g3v2240910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2240910.1 Non Chatacterized Hit- tr|D7TXX5|D7TXX5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,92.81,0,Radical_SAM,Radical SAM; Elongator protein 3, MiaB family,
Radical SA,Elongator protein 3/MiaB/NifB;,CUFF.57005.1
(1020 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60498 similar to UniRef100_A7QNP2 Cluster: Chromosome... 1350 0.0
gnl|LJGI|TC64479 homologue to UniRef100_A7QNP2 Cluster: Chromoso... 563 e-160
>gnl|LJGI|TC60498 similar to UniRef100_A7QNP2 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 789
Score = 1350 bits (681), Expect = 0.0
Identities = 681/681 (100%)
Strand = Plus / Plus
Query: 1 atgattcagcaatcgctcttcaacccaccttcgatcccgttctcaacaacaacaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgattcagcaatcgctcttcaacccaccttcgatcccgttctcaacaacaacaacaaaa 168
Query: 61 cgctcccgtttccaccaccctccttccgcctccgcgaagctgacgacgacgacggaatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgctcccgtttccaccaccctccttccgcctccgcgaagctgacgacgacgacggaatcg 228
Query: 121 gagcagcagaagagtgggcttggaccgtacacggggagagacccgaacgtgaagaagccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gagcagcagaagagtgggcttggaccgtacacggggagagacccgaacgtgaagaagccg 288
Query: 181 gaatggttgagacagaaagctcctcaaggcgaaaggttccagcagattaaggattcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaatggttgagacagaaagctcctcaaggcgaaaggttccagcagattaaggattcattg 348
Query: 241 tcacatttgaagctcaacactgtttgcgaggaggctcagtgccccaacattggagagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcacatttgaagctcaacactgtttgcgaggaggctcagtgccccaacattggagagtgt 408
Query: 301 tggaatggaggtggagatggtatcgcgactgcgacgatcatgcttcttggagatacttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tggaatggaggtggagatggtatcgcgactgcgacgatcatgcttcttggagatacttgc 468
Query: 361 acccgtggctgtagattttgcgctgtgaagacaagtagaaacccggcgcctcctgatccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acccgtggctgtagattttgcgctgtgaagacaagtagaaacccggcgcctcctgatccg 528
Query: 421 atggagccggagaatactgccaatgccattgcaagttgggatgtggattacattgtccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atggagccggagaatactgccaatgccattgcaagttgggatgtggattacattgtccta 588
Query: 481 acaagcgtggatcgtgatgatatacctgatggaggaagtggccattttgctcagactgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acaagcgtggatcgtgatgatatacctgatggaggaagtggccattttgctcagactgtc 648
Query: 541 aaagctatgaagaatctcaaacctgagatcatggtggagtgcttaacctctgattttcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aaagctatgaagaatctcaaacctgagatcatggtggagtgcttaacctctgattttcgg 708
Query: 601 ggtgaccttacggctgtagaaactttggttcactcaggtttagatgtttttgctcacaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ggtgaccttacggctgtagaaactttggttcactcaggtttagatgtttttgctcacaat 768
Query: 661 gttgagacagtcaaacggctc 681
|||||||||||||||||||||
Sbjct: 769 gttgagacagtcaaacggctc 789
>gnl|LJGI|TC64479 homologue to UniRef100_A7QNP2 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(28%)
Length = 711
Score = 563 bits (284), Expect = e-160
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 737 aacatgcaaaacatagcaaggagggtatgataaccaaaacttcaataatgctgggccttg 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacatgcaaaacatagcaaggagggtatgataaccaaaacttcaataatgctgggccttg 60
Query: 797 gagaatccgatgatgagcttaaggaagtgatggctgatttgagggccatagatgtggata 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaatccgatgatgagcttaaggaagtgatggctgatttgagggccatagatgtggata 120
Query: 857 ttttgacacttggtcaatatttgcagccaactcccttgcacttgactgtaaaagagtatg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttgacacttggtcaatatttgcagccaactcccttgcacttgactgtaaaagagtatg 180
Query: 917 ttactcctgagaagtttgctttctggaaagaatacggggagtcgattggttttcgttatg 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttactcctgagaagtttgctttctggaaagaatacggggagtcgattggttttcgttatg 240
Query: 977 tagctagtgggccactggtgcgatcttcgtatagggctggggaa 1020
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctagtgggccactggtgcgatcttcgtatagggctggggaa 284