Miyakogusa Predicted Gene
- Lj5g3v2240860.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2240860.3 Non Chatacterized Hit- tr|I1LF15|I1LF15_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.7,0,TFCD_C,Tubulin-specific chaperone D, C-terminal; ARM
repeat,Armadillo-type fold; HEAT_REPEAT,HEAT, t,CUFF.57006.3
(3825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV780944 similar to UniRef100_Q8L5R3 Cluster: Tubulin f... 902 0.0
>gnl|LJGI|AV780944 similar to UniRef100_Q8L5R3 Cluster: Tubulin folding cofactor D; n=1;
Arabidopsis thaliana|Rep: Tubulin folding cofactor D -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 542
Score = 902 bits (455), Expect = 0.0
Identities = 522/543 (96%), Gaps = 1/543 (0%)
Strand = Plus / Plus
Query: 988 cttacttcccttcctcatcggttgccttcatggcgttatatgggaagaaccaccaaacta 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttacttcccttcctcatcggttgccttcatggcgttatatgggaagaaccaccaaacta 60
Query: 1048 aatgttgctttgaatacatcgagtaaatttcatcactccaacttggctgtgaacgacaac 1107
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgt-gctttgaatacatcgagtaaatttcatcactccaacttggctgtgaacgacaac 119
Query: 1108 tgtaccaactcaaatgaaattacagatggcgcagaggatgaggatatggatgttccggaa 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 120 tgtaccaactcaaatgaaattacagatggcgcagaggatgaggatatggatgtacgggaa 179
Query: 1168 aatgttgaagagattattgagatgttgttatctggtttgagggatatggatactgttgtt 1227
||||| |||||||| |||||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 180 aatgtagaagagataattgagatgtcgtgatctggtgtgagggatatggatactgttgtg 239
Query: 1228 cgttggtctgcagcaaaaggtattggacgcataacttcgcaattgacatcttccctttgt 1287
||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgtgggtctgcagcaataggtatcggacgcataacttcgcaattgacatcttccctttgt 299
Query: 1288 gaggaggttttatcctctgtttcggagctgttttcacctggtgagggtgatggttcatgg 1347
|||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 300 gaggaggtttcatcctctgtgtcggagctgttttcacctggtgagggtgctggttcatgg 359
Query: 1348 catggaggctgcttagctttggctgaacttgctcgtagaggcttgctcttacctgcaagt 1407
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 360 catggaggctgcttagctttggctgcacttgctcgtagaggcttgctcttacctgcaagt 419
Query: 1408 cttcccaaagttgttcctgttgttgtgaaggctctacattatgatgttcgaagaggtcca 1467
|||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 420 cttcccaaagttgtgcctgtggaggtgaaggctctacattatgatgtacgaagaggtcca 479
Query: 1468 cacagtgttgggtctcatgtacgtgatgctgctgcttatgtatgttgggcatttggacgt 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cacagtgttgggtctcatgtacgtgatgctgctgcttatgtatgttgggcatttggacgt 539
Query: 1528 gca 1530
|||
Sbjct: 540 gca 542