Miyakogusa Predicted Gene
- Lj5g3v2240790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2240790.1 tr|I1LF09|I1LF09_SOYBN Ribonuclease OS=Glycine
max GN=Gma.22030 PE=3 SV=1,84.62,0,no description,NULL; no
description,Ribonuclease HII, helix-loop-helix cap domain;
RIBONUCLEASE H2 S,CUFF.56989.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70038 similar to UniRef100_A7QL30 Cluster: Ribonuclea... 1237 0.0
gnl|LJGI|FS340707 similar to UniRef100_A7QL30 Cluster: Ribonucle... 444 e-124
>gnl|LJGI|TC70038 similar to UniRef100_A7QL30 Cluster: Ribonuclease; n=1; Vitis
vinifera|Rep: Ribonuclease - Vitis vinifera (Grape),
partial (91%)
Length = 1350
Score = 1237 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Plus
Query: 1 atgctcaagaagaataagataaacttgaatgagatatcacatgactctgccatgggcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgctcaagaagaataagataaacttgaatgagatatcacatgactctgccatgggcctc 511
Query: 61 gtcgatagggtgctaaaaatgggggtgcttctaactgaggtttatatagacacagttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtcgatagggtgctaaaaatgggggtgcttctaactgaggtttatatagacacagttgga 571
Query: 121 gatccagggaaatatgaagtgaagctgtccaaaaatttcccatctatcaaattcgtggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gatccagggaaatatgaagtgaagctgtccaaaaatttcccatctatcaaattcgtggtt 631
Query: 181 gcaaagaaggctgatagtctttatcctgttgtcagtggtgcaagcatagttgcaaaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcaaagaaggctgatagtctttatcctgttgtcagtggtgcaagcatagttgcaaaggtc 691
Query: 241 acgagagaccaagctataagacaatgggtgcttgaagagactgctgaaaacatgcacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acgagagaccaagctataagacaatgggtgcttgaagagactgctgaaaacatgcacagg 751
Query: 301 aattttggctctggatatcctggagatcccacgaccaagtcttggctagaacatcacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aattttggctctggatatcctggagatcccacgaccaagtcttggctagaacatcacaaa 811
Query: 361 aattctgtctttggatttccaacattggtccggtttagttgggggacctgcaccacttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aattctgtctttggatttccaacattggtccggtttagttgggggacctgcaccacttat 871
Query: 421 tttaaagatggtgctgaagtcttatgggaggctgacaaagatgaagatgaaggcggcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tttaaagatggtgctgaagtcttatgggaggctgacaaagatgaagatgaaggcggcaat 931
Query: 481 aataatagccgcaagcgacaactgaaattaagcaatgtgggtttcaccacatccaagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 aataatagccgcaagcgacaactgaaattaagcaatgtgggtttcaccacatccaagaga 991
Query: 541 agtgaagaaatagaatcaagtggtaaaggacgctctaggttttttcaggctcggaaactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 agtgaagaaatagaatcaagtggtaaaggacgctctaggttttttcaggctcggaaactt 1051
Query: 601 gagcacctaagtcatttctgacaa 624
||||||||||||||||||||||||
Sbjct: 1052 gagcacctaagtcatttctgacaa 1075
>gnl|LJGI|FS340707 similar to UniRef100_A7QL30 Cluster: Ribonuclease; n=1; Vitis
vinifera|Rep: Ribonuclease - Vitis vinifera (Grape),
partial (44%)
Length = 746
Score = 444 bits (224), Expect = e-124
Identities = 227/228 (99%)
Strand = Plus / Plus
Query: 98 aggtttatatagacacagttggagatccagggaaatatgaagtgaagctgtccaaaaatt 157
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 342 aggtttatatagacacagttggagatccaggggaatatgaagtgaagctgtccaaaaatt 401
Query: 158 tcccatctatcaaattcgtggttgcaaagaaggctgatagtctttatcctgttgtcagtg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcccatctatcaaattcgtggttgcaaagaaggctgatagtctttatcctgttgtcagtg 461
Query: 218 gtgcaagcatagttgcaaaggtcacgagagaccaagctataagacaatgggtgcttgaag 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtgcaagcatagttgcaaaggtcacgagagaccaagctataagacaatgggtgcttgaag 521
Query: 278 agactgctgaaaacatgcacaggaattttggctctggatatcctggag 325
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agactgctgaaaacatgcacaggaattttggctctggatatcctggag 569
Score = 178 bits (90), Expect = 3e-44
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 12 gaataagataaacttgaatgagatatcacatgactctgccatgggcctcgtcgatagggt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 gaataagataaacttgaatgagatatcacatgactctgccatgggcctcgtcgatagggt 88
Query: 72 gctaaaaatgggggtgcttctaactgaggt 101
||||||||||||||||||||||||||||||
Sbjct: 89 gctaaaaatgggggtgcttctaactgaggt 118
Score = 168 bits (85), Expect = 3e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 324 agatcccacgaccaagtcttggctagaacatcacaaaaattctgtctttggatttccaac 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agatcccacgaccaagtcttggctagaacatcacaaaaattctgtctttggatttccaac 721
Query: 384 attggtccggtttagttgggggacc 408
|||||||||||||||||||||||||
Sbjct: 722 attggtccggtttagttgggggacc 746