Miyakogusa Predicted Gene
- Lj5g3v2239750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2239750.1 Non Chatacterized Hit- tr|B4FZI1|B4FZI1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.11,3e-19,ZF_RING_2,Zinc finger, RING-type; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,Zi,CUFF.56986.1
(457 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58894 similar to UniRef100_A7NT69 Cluster: Chromosome... 100 1e-20
>gnl|LJGI|TC58894 similar to UniRef100_A7NT69 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1682
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 339 tccaagtggagccgatctctctccgagaatgattctgccaggaagaagggcttttgggcg 398
||||||||||| ||||| | || ||||||||||||||||||||||| |||||||||||
Sbjct: 1362 tccaagtggaggcgatcaatgtctgagaatgattctgccaggaagaaaggcttttgggca 1421
Query: 399 agatatcgtaaagattga 416
||||||||||||||||||
Sbjct: 1422 agatatcgtaaagattga 1439
Score = 97.6 bits (49), Expect = 6e-20
Identities = 109/129 (84%)
Strand = Plus / Plus
Query: 207 ctgtggtcatgtgtttcatgcagaatgcttggagaccatgacagcaaaggaagatagtta 266
||||||||||| | ||||||||||||||| |||||||||||| || ||| |||||| ||
Sbjct: 1040 ctgtggtcatgcatatcatgcagaatgcttagagaccatgacaacagaggtagataggta 1099
Query: 267 tgatccagtttgtctagtttgtacggctggagagaagaacttgttgaagttgtccaaaaa 326
|||||||| ||||| | |||||| || |||||| ||| |||||| |||| ||| || |||
Sbjct: 1100 tgatccagcttgtccaatttgtatggttggagataagcacttgtcgaagatgttcagaaa 1159
Query: 327 aggacttag 335
||| |||||
Sbjct: 1160 aggtcttag 1168