Miyakogusa Predicted Gene

Lj5g3v2239750.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2239750.1 Non Chatacterized Hit- tr|B4FZI1|B4FZI1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.11,3e-19,ZF_RING_2,Zinc finger, RING-type; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,Zi,CUFF.56986.1
         (457 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58894 similar to UniRef100_A7NT69 Cluster: Chromosome...   100   1e-20

>gnl|LJGI|TC58894 similar to UniRef100_A7NT69 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (83%)
          Length = 1682

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                        
Query: 339  tccaagtggagccgatctctctccgagaatgattctgccaggaagaagggcttttgggcg 398
            ||||||||||| |||||  | || ||||||||||||||||||||||| ||||||||||| 
Sbjct: 1362 tccaagtggaggcgatcaatgtctgagaatgattctgccaggaagaaaggcttttgggca 1421

                              
Query: 399  agatatcgtaaagattga 416
            ||||||||||||||||||
Sbjct: 1422 agatatcgtaaagattga 1439



 Score = 97.6 bits (49), Expect = 6e-20
 Identities = 109/129 (84%)
 Strand = Plus / Plus

                                                                        
Query: 207  ctgtggtcatgtgtttcatgcagaatgcttggagaccatgacagcaaaggaagatagtta 266
            |||||||||||  | ||||||||||||||| |||||||||||| || ||| |||||| ||
Sbjct: 1040 ctgtggtcatgcatatcatgcagaatgcttagagaccatgacaacagaggtagataggta 1099

                                                                        
Query: 267  tgatccagtttgtctagtttgtacggctggagagaagaacttgttgaagttgtccaaaaa 326
            |||||||| ||||| | |||||| || |||||| ||| |||||| |||| ||| || |||
Sbjct: 1100 tgatccagcttgtccaatttgtatggttggagataagcacttgtcgaagatgttcagaaa 1159

                     
Query: 327  aggacttag 335
            ||| |||||
Sbjct: 1160 aggtcttag 1168