Miyakogusa Predicted Gene
- Lj5g3v2239730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2239730.1 CUFF.56984.1
(1380 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59287 similar to UniRef100_A7NT64 Cluster: Chromosome... 1384 0.0
gnl|LJGI|TC64173 similar to UniRef100_A7NT64 Cluster: Chromosome... 1207 0.0
gnl|LJGI|BW598616 similar to UniRef100_A7PCK8 Cluster: Chromosom... 289 2e-77
gnl|LJGI|FS336695 similar to UniRef100_A7NT64 Cluster: Chromosom... 212 4e-54
gnl|LJGI|DC598137 similar to UniRef100_A7NT64 Cluster: Chromosom... 82 1e-14
gnl|LJGI|TC80611 52 9e-06
>gnl|LJGI|TC59287 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 842
Score = 1384 bits (698), Expect = 0.0
Identities = 698/698 (100%)
Strand = Plus / Plus
Query: 1 atggcgaagcattccgtgaagaagcggtggccattagtgttactggccttcttgtccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcgaagcattccgtgaagaagcggtggccattagtgttactggccttcttgtccgtc 204
Query: 61 tccacggtgacggttctcttcatgagaccaaacaatgccgattcctgcaacaccaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tccacggtgacggttctcttcatgagaccaaacaatgccgattcctgcaacaccaagaac 264
Query: 121 ttcgaacaacaacggagtcagattcgctcacctgtacaagatagacctggtcccagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcgaacaacaacggagtcagattcgctcacctgtacaagatagacctggtcccagcccc 324
Query: 181 ttagatttcatgaagtccaagcttgttctcatggtctcgcacgagctttctctttcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttagatttcatgaagtccaagcttgttctcatggtctcgcacgagctttctctttcaggt 384
Query: 241 gggcctttgcttctgatggagttagcgtttctgttgagaggggttggttctgatgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggcctttgcttctgatggagttagcgtttctgttgagaggggttggttctgatgttgtt 444
Query: 301 tggatcaccaatcagaatcctgtagaaaatgaccaggtgatttacagtttggaaagcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggatcaccaatcagaatcctgtagaaaatgaccaggtgatttacagtttggaaagcaag 504
Query: 361 atgttggacagaggagtccaggtcttgcctgccaaaggtgaaaaggctattgatacagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgttggacagaggagtccaggtcttgcctgccaaaggtgaaaaggctattgatacagct 564
Query: 421 cttaaagctgatatggtcattctaaatactgctgtagctggaaagtggctggatgctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttaaagctgatatggtcattctaaatactgctgtagctggaaagtggctggatgctgtt 624
Query: 481 ctcaaggaaaaagtttcccgtgttcttccaaaggttttatggtggattcatgagatgcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctcaaggaaaaagtttcccgtgttcttccaaaggttttatggtggattcatgagatgcgg 684
Query: 541 gggcattatttcaaagaggaatatgttaagcacctcccctttgttgcaggtgccatgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gggcattatttcaaagaggaatatgttaagcacctcccctttgttgcaggtgccatgatt 744
Query: 601 gattcacatacaactgcagagtactggaaaaataggactagggagcgtttaaggattaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gattcacatacaactgcagagtactggaaaaataggactagggagcgtttaaggattaaa 804
Query: 661 atgcctgaaacttatgttgtacatcttggaaatagtaa 698
||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgcctgaaacttatgttgtacatcttggaaatagtaa 842
>gnl|LJGI|TC64173 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 854
Score = 1207 bits (609), Expect = 0.0
Identities = 612/613 (99%)
Strand = Plus / Plus
Query: 768 tggagtaagaagtgatgatctgctttttgccatcataaatagtgtttcacgtggtaaagg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagtaagaagtgatgatctgctttttgccatcataaatagtgtttcacgtggtaaagg 60
Query: 828 gcaggatctatttctccgctccttttatgaaagtttgcagttcattcaagagaagaaact 887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaggatctatttctccgctccttttatgaaagtttgcagttcattcaagagaagaaact 120
Query: 888 tcagttgccatctttgcacgctgtagttgtagggagtgatatgaatgctcagacaaagtt 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagttgccatctttgcacgctgtagttgtagggagtgatatgaatgctcagacaaagtt 180
Query: 948 tgaaatggaactgcgtaaatttgttatagataaaaagattcaggaccgtgtgcactttgt 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaatggaactgcgtaaatttgttatagataaaaagattcaggaccgtgtgcactttgt 240
Query: 1008 taacaaaaccctggcagtggctccatacctggcttctatcgatgttcttgttcaaaattc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacaaaaccctggcagtggctccatacctggcttctatcgatgttcttgttcaaaattc 300
Query: 1068 tcaggcacgaggagaatgttttggaaggataaccattgaagcaatggcatttcgcctgcc 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaggcacgaggagaatgttttggaaggataaccattgaagcaatggcatttcgcctgcc 360
Query: 1128 tgtactgggaactgcagctggaggcaccatggaaattgtggtgaatggttcaacgggctt 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtactgggaactgcagctggaggcaccatggaaattgtggtgaatggttcaacgggctt 420
Query: 1188 gctgcatcctgttggaaaaggcggcgtgacacctcttgcaaataacattgtgaaattggc 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgcatcctgttggaaaaggcggcgtgacacctcttgcaaataacattgtgaaattggc 480
Query: 1248 aactcatgttgaaaagaggctgactatgggaaagaaagggtatgagagagtgaaggagag 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aactcatgttgaaaagaggctgactatgggaaagaaagggtatgagagagtgaaggagag 540
Query: 1308 gtttatggagaagcacatgtcggatagaattgcattggttttgaaggatgttttggctag 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttatggagaagcacatgtcggatagaattgcattggttttgaaggatgttttggctag 600
Query: 1368 gcaacattaaatt 1380
|||||||||||||
Sbjct: 601 gcaacattaaatt 613
>gnl|LJGI|BW598616 similar to UniRef100_A7PCK8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 480
Score = 289 bits (146), Expect = 2e-77
Identities = 170/178 (95%)
Strand = Plus / Plus
Query: 176 gccccttagatttcatgaagtccaagcttgttctcatggtctcgcacgagctttctcttt 235
|||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||
Sbjct: 303 gccccttatatttcccgaagtcgaagcttgtaaaaatggtctcgcacgagctttctcttt 362
Query: 236 caggtgggcctttgcttctgatggagttagcgtttctgttgagaggggttggttctgatg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caggtgggcctttgcttctgatggagttagcgtttctgttgagaggggttggttctgatg 422
Query: 296 ttgtttggatcaccaatcagaatcctgtagaaaatgaccaggtgatttacagtttgga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttgtttggatcaccaatcagaatcctgtagaaaatgaccaggtgatttacagtttgga 480
>gnl|LJGI|FS336695 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 592
Score = 212 bits (107), Expect = 4e-54
Identities = 326/399 (81%)
Strand = Plus / Plus
Query: 187 ttcatgaagtccaagcttgttctcatggtctcgcacgagctttctctttcaggtgggcct 246
||||||||||| |||| ||||| |||||||||||||| || ||||| || || || |||
Sbjct: 194 ttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctccggcggtcct 253
Query: 247 ttgcttctgatggagttagcgtttctgttgagaggggttggttctgatgttgtttggatc 306
|||| || |||||||| |||||||||||| | || || || || || || |||||||||
Sbjct: 254 ctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtcgtttggatc 313
Query: 307 accaatcagaatcctgtagaaaatgaccaggtgatttacagtttggaaagcaagatgttg 366
||||| ||||| ||| | || |||| | | | ||||||||||| | |||||||||
Sbjct: 314 accaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaataagatgttg 373
Query: 367 gacagaggagtccaggtcttgcctgccaaaggtgaaaaggctattgatacagctcttaaa 426
|||||||| || ||||| ||| |||| | ||| || ||||| | ||||| ||||||||
Sbjct: 374 gacagaggggtgcaggttttggctgcaagaggcaaagaggctgtggatacggctcttaag 433
Query: 427 gctgatatggtcattctaaatactgctgtagctggaaagtggctggatgctgttctcaag 486
|| || | || ||||| || |||||||| || || |||||||| ||||| |||||||||
Sbjct: 434 gcggacctagtgattctgaacactgctgtggccgggaagtggcttgatgcggttctcaag 493
Query: 487 gaaaaagtttcccgtgttcttccaaaggttttatggtggattcatgagatgcgggggcat 546
||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 494 gaaaaagtttcggaggttcttccaaaggttttgtggtggattcatgaaatgcgagggcat 553
Query: 547 tatttcaaagaggaatatgttaagcacctcccctttgtt 585
||||||||| ||||||||||||||||||||| ||||||
Sbjct: 554 tatttcaaaatggaatatgttaagcacctcccttttgtt 592
>gnl|LJGI|DC598137 similar to UniRef100_A7NT64 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 559
Score = 81.8 bits (41), Expect = 1e-14
Identities = 227/289 (78%)
Strand = Plus / Plus
Query: 187 ttcatgaagtccaagcttgttctcatggtctcgcacgagctttctctttcaggtgggcct 246
||||||||||| |||| ||||| |||||||||||||| || ||||| || || || |||
Sbjct: 271 ttcatgaagtcgaagcgggttctgatggtctcgcacgaactctctctctccggcggtcct 330
Query: 247 ttgcttctgatggagttagcgtttctgttgagaggggttggttctgatgttgtttggatc 306
|||| || |||||||| |||||||||||| | || || || || || || |||||||||
Sbjct: 331 ctgctgctcatggagttggcgtttctgttgcgcggtgtcggctccgacgtcgtttggatc 390
Query: 307 accaatcagaatcctgtagaaaatgaccaggtgatttacagtttggaaagcaagatgttg 366
||||| ||||| ||| | || |||| | | | ||||||||||| | |||||||||
Sbjct: 391 accaaccagaagcctctgcaatctgacgacattgtgtacagtttggagaataagatgttg 450
Query: 367 gacagaggagtccaggtcttgcctgccaaaggtgaaaaggctattgatacagctcttaaa 426
|||||||| || ||||| ||| |||| | ||| || ||||| | ||||| ||||||||
Sbjct: 451 gacagaggggtgcaggttttggctgcaagaggcaaagaggctgtggatacggctcttaag 510
Query: 427 gctgatatggtcattctaaatactgctgtagctggaaagtggctggatg 475
|| || | || ||||| || |||||||| || || |||||||| ||||
Sbjct: 511 gcggacctagtgattctgaacactgctgtggccgggaagtggcttgatg 559
>gnl|LJGI|TC80611
Length = 764
Score = 52.0 bits (26), Expect = 9e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 94 aatgccgattcctgcaacaccaagaacttc 123
|||||||||||||||||||||||| |||||
Sbjct: 65 aatgccgattcctgcaacaccaagcacttc 36