Miyakogusa Predicted Gene
- Lj5g3v2238710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2238710.1 Non Chatacterized Hit- tr|I1M880|I1M880_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49002
PE,65.99,0,HOMEOBOX_2,Homeodomain; seg,NULL; domain associated with
HOX domains,POX; Homeodomain,Homeodomain; n,CUFF.56985.1
(1674 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59712 homologue to UniRef100_A7NT59 Cluster: Chromoso... 1203 0.0
gnl|LJGI|TC62183 similar to UniRef100_A7P7U4 Cluster: Chromosome... 1138 0.0
gnl|LJGI|GO010290 similar to UniRef100_Q9SIW1 Cluster: BEL1-like... 337 1e-91
gnl|LJGI|TC80558 homologue to UniRef100_Q89I12 Cluster: Flagella... 74 3e-12
gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-lik... 70 5e-11
gnl|LJGI|AV419283 homologue to UniRef100_Q8LLD9 Cluster: BEL1-re... 60 5e-08
>gnl|LJGI|TC59712 homologue to UniRef100_A7NT59 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 951
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1068 ccccaaggattcagagaaaataatgctagcaaggcaaactggcttgacccgtaaccaggt 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccccaaggattcagagaaaataatgctagcaaggcaaactggcttgacccgtaaccaggt 60
Query: 1128 ggcaaattggttcatcaatgcaagggtgcgtctttggaagccaatggttgaggaaatata 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaaattggttcatcaatgcaagggtgcgtctttggaagccaatggttgaggaaatata 120
Query: 1188 caaagaagagattggtgattccgagataatgaagtgcaatctttcatcagaaaacacact 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagaagagattggtgattccgagataatgaagtgcaatctttcatcagaaaacacact 180
Query: 1248 caaaggtaaaagagatggtgttcaagagtctaacaataaatgggaagagtcacaggacaa 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaggtaaaagagatggtgttcaagagtctaacaataaatgggaagagtcacaggacaa 240
Query: 1308 ttcaatagctgttgataataatagtatccaattggagcatgcctcctccaatacagaaga 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcaatagctgttgataataatagtatccaattggagcatgcctcctccaatacagaaga 300
Query: 1368 aaatgtgatggattctgagactaggaaattgcagggtaaccaaaggtttagcctttattc 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgtgatggattctgagactaggaaattgcagggtaaccaaaggtttagcctttattc 360
Query: 1428 aatgtcccaaatggattctactcctgccaccacatatgatgatgatatatcacttgcatt 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgtcccaaatggattctactcctgccaccacatatgatgatgatatatcacttgcatt 420
Query: 1488 ggagttgaggaactgtgaaagcgatggatttggcattgttgatgacgccatgcacaaaag 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagttgaggaactgtgaaagcgatggatttggcattgttgatgacgccatgcacaaaag 480
Query: 1548 acgtaatcaaacattggcttcatctccagagactgatttactagattaccatttcacaga 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgtaatcaaacattggcttcatctccagagactgatttactagattaccatttcacaga 540
Query: 1608 ttcaggaaagcaacaacacagcaggttcagcaatcctcatctgatgcatgagtttgttgt 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaggaaagcaacaacacagcaggttcagcaatcctcatctgatgcatgagtttgttgt 600
Query: 1668 atgaaat 1674
|||||||
Sbjct: 601 atgaaat 607
>gnl|LJGI|TC62183 similar to UniRef100_A7P7U4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 765
Score = 1138 bits (574), Expect = 0.0
Identities = 600/606 (99%), Gaps = 2/606 (0%)
Strand = Plus / Plus
Query: 1 atgtattcagaccatgccttttcatcatggtcctatgcggaaatgttatcaggaggttct 60
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 162 atgtattcagaccaagccttttcatcagggtcctatgcggaaatgttatcaggaggttct 221
Query: 61 ttgttgcctcataactatgctgaatctgtaggaggatcccaaaatgaggagcaaaacatg 120
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 222 ttgttacctcataactatgctgaatctgtaggaggatcacaaaatgaggagcaaaacatg 281
Query: 121 cagtgccagggcctatctcttagtctcggcactgtaatgccttctgctggatctgtccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cagtgccagggcctatctcttagtctcggcactgtaatgccttctgctggatctgtccct 341
Query: 181 caatttcaataccagtatcccgacaccggtttcttaccactactgaattcttttgttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caatttcaataccagtatcccgacaccggtttcttaccactactgaattcttttgttcct 401
Query: 241 aacatgaaaggaaccatgtcaattaaagatgatgagaccaacctacataaggagttgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aacatgaaaggaaccatgtcaattaaagatgatgagaccaacctacataaggagttgaga 461
Query: 301 agtgctgaaagcatggcatctgtgtcttctgaaggctttcatgacatgatcaaaagggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agtgctgaaagcatggcatctgtgtcttctgaaggctttcatgacatgatcaaaagggaa 521
Query: 361 ggtttttataaccagcacccttcaatctgttctaatccatgccttcaaggatcacaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ggtttttataaccagcacccttcaatctgttctaatccatgccttcaaggatcacaaggt 581
Query: 421 ttttcaaacattgtccaaaactcgcggtacctcaaggcggcacaggagttgcttgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ttttcaaacattgtccaaaactcgcggtacctcaaggcggcacaggagttgcttgatgaa 641
Query: 481 gtagttagtgtccggaaggctttgaagcaatctggaatggagaaacaagaaaatttccgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gtagttagtgtccggaaggctttgaagcaatctggaatggagaaacaagaaaatttccgt 701
Query: 541 gatgttggattagatggatccaaaggttctgatggtaaatctaccagtcaatctgtgcaa 600
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 702 gatgttggattagatggatccaaa-gttctgatggt-aatctaccagtcaatctgtgcaa 759
Query: 601 atatct 606
||||||
Sbjct: 760 atatct 765
>gnl|LJGI|GO010290 similar to UniRef100_Q9SIW1 Cluster: BEL1-like homeodomain protein 7;
n=1; Arabidopsis thaliana|Rep: BEL1-like homeodomain
protein 7 - Arabidopsis thaliana (Mouse-ear cress),
partial (20%)
Length = 695
Score = 337 bits (170), Expect = 1e-91
Identities = 341/398 (85%)
Strand = Plus / Plus
Query: 910 ataccccgtctccgctatgtggatcagcagcttagacaacaaaaagcccttcagcagctt 969
||||||||||| ||| ||||||||||| |||| ||||||||||| ||||||||||| |||
Sbjct: 4 ataccccgtcttcgcaatgtggatcagaagctcagacaacaaaaggcccttcagcaactt 63
Query: 970 ggtgttatgagacaagcttggaggcctcagaggggactccctgaaagctctgtttcaata 1029
||||| ||| ||||||||||||| ||||| |||||||| || |||| ||||||||| |||
Sbjct: 64 ggtgtcatgcgacaagcttggagacctcaaaggggacttcccgaaaactctgtttccata 123
Query: 1030 ctccgtgcttggctctttgagcattttcttcatccttaccccaaggattcagagaaaata 1089
|||||||| ||||| ||||||||||| || | ||||| || |||||||| ||||||||
Sbjct: 124 ctccgtgcatggctgtttgagcatttcctcaacccttatccaaaggattctgagaaaatt 183
Query: 1090 atgctagcaaggcaaactggcttgacccgtaaccaggtggcaaattggttcatcaatgca 1149
||||| || |||||||| ||||| | | | ||||||||||||||||||||||| ||||||
Sbjct: 184 atgctggctaggcaaacaggcttaagcagaaaccaggtggcaaattggttcattaatgca 243
Query: 1150 agggtgcgtctttggaagccaatggttgaggaaatatacaaagaagagattggtgattcc 1209
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 244 agggtgcgtctttggaagccaatggttgaagaaatgtacaaagaagaatttggtgattct 303
Query: 1210 gagataatgaagtgcaatctttcatcagaaaacacactcaaaggtaaaagagatggtgtt 1269
||||| | | |||| |||| |||||||||||||| ||||| | |||||| | ||||
Sbjct: 304 gagatgagcagcagcaaccttttatcagaaaacacacccaaagcttcaagagaggatgtt 363
Query: 1270 caagagtctaacaataaatgggaagagtcacaggacaa 1307
|||| |||| ||||||| |||||||||| | ||||||
Sbjct: 364 caagtgtctggcaataaaagggaagagtctcgggacaa 401
>gnl|LJGI|TC80558 homologue to UniRef100_Q89I12 Cluster: Flagellar basal-body rod
protein; n=1; Bradyrhizobium japonicum|Rep: Flagellar
basal-body rod protein - Bradyrhizobium japonicum,
partial (5%)
Length = 548
Score = 73.8 bits (37), Expect = 3e-12
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 1543 aaaagacgtaatcaaacattggcttcatctccagagactgatttactagattaccatttc 1602
||||||| | |||||||||||||||| || | ||||| |||| | ||||| || ||||||
Sbjct: 476 aaaagacatgatcaaacattggcttcttcacaagagaatgatatgctagagtatcatttc 417
Query: 1603 acagattcaggaaagcaacaacaca 1627
||||| || ||||||||||||||||
Sbjct: 416 acagactctggaaagcaacaacaca 392
>gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-like homeodomain protein
3; n=1; Solanum lycopersicum|Rep: Bell-like homeodomain
protein 3 - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (30%)
Length = 1304
Score = 69.9 bits (35), Expect = 5e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 1130 caaattggttcatcaatgcaagggtgcgtctttggaagccaatggttgaggaaat 1184
|||||||||| ||||||||||||||| | ||||||||||||||||| || |||||
Sbjct: 306 caaattggtttatcaatgcaagggtgaggctttggaagccaatggtggaagaaat 360
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1036 gcttggctctttgagcattttcttcatccttaccc 1070
|||||||||||||||||||||||||| || |||||
Sbjct: 212 gcttggctctttgagcattttcttcacccgtaccc 246
>gnl|LJGI|AV419283 homologue to UniRef100_Q8LLD9 Cluster: BEL1-related homeotic protein
29; n=1; Solanum tuberosum|Rep: BEL1-related homeotic
protein 29 - Solanum tuberosum (Potato), partial (6%)
Length = 155
Score = 60.0 bits (30), Expect = 5e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1135 tggttcatcaatgcaagggtgcgtctttggaagccaatggttgaggaaat 1184
||||| ||||||||||||||| | || |||||||||||||| ||||||||
Sbjct: 15 tggtttatcaatgcaagggtgaggctatggaagccaatggtagaggaaat 64