Miyakogusa Predicted Gene
- Lj5g3v2238650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2238650.1 Non Chatacterized Hit- tr|I3SVP4|I3SVP4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,39.57,3e-19,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; F-b,CUFF.56979.1
(430 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65345 98 5e-20
gnl|LJGI|FS331761 weakly similar to UniRef100_A7P039 Cluster: Ch... 92 3e-18
gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 62 3e-09
gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Ch... 60 1e-08
gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chr... 60 1e-08
>gnl|LJGI|TC65345
Length = 776
Score = 97.6 bits (49), Expect = 5e-20
Identities = 184/229 (80%)
Strand = Plus / Plus
Query: 160 cacacctcaacctcaggtacaatcatgagccaccaacatttaaccttagtgtttgattat 219
|||||||||| ||||||||||||||||| ||||| | || ||||||| | || ||
Sbjct: 133 cacacctcaaactcaggtacaatcatgacccaccctcgattggccttagtttccgaagat 192
Query: 220 tcgaccaaggccgtaacatattctatgcatccattacttgaaaactctccaaccctcacg 279
|||| ||||| || |||||||||||| || |||| | ||||| | |||||||| |
Sbjct: 193 tcgagcaaggttgttacatattctatgaattcattcttcaaaaacccaccaacccttaat 252
Query: 280 aaaaaacttaccttcaagatggaaggcgagtccaaccattttataggttcaatcaatgga 339
|||||| || || ||||||||||| |||| |||||||||| |||||||||||||||||
Sbjct: 253 gaaaaacgtaaatttaagatggaaggagagtacaaccattttgtaggttcaatcaatgga 312
Query: 340 ctagtgtgttttcgtgatgatcaggattgtattaaattgtggaaccctt 388
|| ||||||| |||||| | | |||||| ||| ||||||||||||||
Sbjct: 313 ttactgtgtttgtgtgatgttaatgattgttttagattgtggaaccctt 361
>gnl|LJGI|FS331761 weakly similar to UniRef100_A7P039 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 433
Score = 91.7 bits (46), Expect = 3e-18
Identities = 243/308 (78%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 32 taccggacgaactcatctacgagatccttgtgaaacttccggtgaaatctcttatgcgat 91
|||| |||||||||||||||||||||||| |||| ||||| ||| |||| ||| ||||
Sbjct: 75 taccagacgaactcatctacgagatccttctgaagcttccagtggaatccctttggcgac 134
Query: 92 ttaagtgcgtctgcaaatcatggaaaatcctaatttttcattcccaatttttgaatgatc 151
| | | |||| |||||| ||||||||| |||||||| || |||||||| || ||||
Sbjct: 135 tcaggcgcgtatgcaaaacatggaaaaccctaatttcccacccccaatttgctaaagatc 194
Query: 152 accttcgacacacctcaacctcaggtacaatcatgagccaccaacatttaaccttagtgt 211
|| || |||||||||| ||||||||||||||||| ||| | | || ||||||| |
Sbjct: 195 acttt---cacacctcaatctcaggtacaatcatgaaccaacctcgattggccttagttt 251
Query: 212 ttgattattcgaccaaggccgtaacatattctatgcatccattacttgaaaactctccaa 271
||| ||||| ||||| || |||||||||||| || ||| | ||||| ||||
Sbjct: 252 acgatgattcgtgcaaggttgttacatattctatgaatttattcttccaaaaccgaccaa 311
Query: 272 ccctcacgaaaaaacttaccttcaagatggaaggcgagtccaaccattttataggttcaa 331
|||| || |||||||| ||||| ||||||||||| || |||| ||||| |||||||||
Sbjct: 312 cccttactaaaaaactcacctttaagatggaaggaaagcacaactattttgtaggttcaa 371
Query: 332 tcaatgga 339
||||||||
Sbjct: 372 tcaatgga 379
>gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 67 cttccggtgaaatctcttatgcgatttaagtgcgtctgcaaatcatggaaaatcctaat 125
|||||||||||||| ||| ||| ||| | ||||||||||||||| ||||||| ||||||
Sbjct: 168 cttccggtgaaatcccttctgcaattcaggtgcgtctgcaaatcctggaaaaccctaat 226
>gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 578
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 86 tgcgatttaagtgcgtctgcaaatcatggaaaatcctaattt 127
||||||| | ||||||||||||||||||||||| ||||||||
Sbjct: 61 tgcgattcaggtgcgtctgcaaatcatggaaaaccctaattt 102
>gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1343
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 68 ttccggtgaaatctcttatgcgatttaagtgcgtctgcaaatcatggaaaatcctaat 125
||||||||| ||| |||| |||| |||||||||||||||||||||||||| |||||
Sbjct: 139 ttccggtgagatccgttataagattgaagtgcgtctgcaaatcatggaaaattctaat 196