Miyakogusa Predicted Gene
- Lj5g3v2220310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2220310.1 Non Chatacterized Hit- tr|I1NFF3|I1NFF3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.796 PE=4,87.64,0,no
description,Pectin lyase fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Pec_lyase_C,Pecta,CUFF.56950.1
(1071 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69958 similar to UniRef100_Q27U75 Cluster: Pectate ly... 1098 0.0
gnl|LJGI|TC68113 similar to UniRef100_Q6U6I9 Cluster: Pectate ly... 864 0.0
gnl|LJGI|TC65970 similar to UniRef100_Q2Z1Y4 Cluster: Pectate ly... 100 3e-20
gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable p... 92 8e-18
gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 78 1e-13
gnl|LJGI|TC61678 similar to UniRef100_Q2Z1Y4 Cluster: Pectate ly... 78 1e-13
gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 76 5e-13
gnl|LJGI|TC74491 similar to UniRef100_Q9M505 Cluster: Pectate ly... 74 2e-12
>gnl|LJGI|TC69958 similar to UniRef100_Q27U75 Cluster: Pectate lyase; n=1; Eucalyptus
globulus subsp. globulus|Rep: Pectate lyase - Eucalyptus
globulus subsp. globulus (Tasmanian blue gum), partial
(38%)
Length = 838
Score = 1098 bits (554), Expect = 0.0
Identities = 587/598 (98%)
Strand = Plus / Plus
Query: 474 cggttatattcatgtggtgaacaatgatttcacgcagtgggagatgtatgccatcggcgg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggttatattcatgtggtgaacaatgatttcacgcagtgggagatgtatgccatcggcgg 60
Query: 534 cagcgctaaccccaccatcaacagccagggtaaccgttatactgctccggcggataataa 593
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cagcgctaaccccaccatcaacagccagagtaaccgttatactgctccggcggataataa 120
Query: 594 tgccaaagaggtgacaaagcgcgtggacacgaatgaaggccagtggagtgattggaattg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgccaaagaggtgacaaagcgcgtggacacgaatgaaggccagtggagtgattggaattg 180
Query: 654 gaagacggagggggatataatggtaaatggagcattctttgtgccttcaggtgcgggggc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagacggagggggatataatggtaaatggagcattctttgtgccttcaggtgcgggggc 240
Query: 714 cagtgctcagtatgcagaagccaccagcttgcaagctaaatccgccgtggcaatcgacca 773
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 241 cagtgctcagtatgcagaagcccccagcttgcaagctaaatccgccgtggcaattgacca 300
Query: 774 gctcaccatgtactcaggagtcttcggcgaccccagggataattgggatcttttccccgg 833
||||||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||
Sbjct: 301 gctcaccatgtactcaggagttttcggcgaccccagggataatggggatttattccccgg 360
Query: 834 tttcaacggcggtgggaccgtgaccggagcctctagcagaggccgcagtggtgggtcctc 893
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 tttcaacggcggtgggaccgtgaccggagcctctagcagaggcagcagtggtgggtcctc 420
Query: 894 cagcagtgacgatggagacttctttgggatgatattcagaggcagcaccagcagccatgc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 421 cagcagtgacgatggagacttctttgggatgatattcagaggcagcaccagcagccaagc 480
Query: 954 accgccctcttcaccctcgtcatccattataattgtttcaacctttttgtctcttttaat 1013
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accgcccttttcaccctcgtcatccattataattgtttcaacctttttgtctcttttaat 540
Query: 1014 tattttcattttggattctaccaccaaccatgctattattctattatcattactatga 1071
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattttcattttggattttaccaccaaccatgctattattctattatcattactatga 598
>gnl|LJGI|TC68113 similar to UniRef100_Q6U6I9 Cluster: Pectate lyase-like protein; n=1;
Brassica napus|Rep: Pectate lyase-like protein - Brassica
napus (Rape), partial (45%)
Length = 1044
Score = 864 bits (436), Expect = 0.0
Identities = 436/436 (100%)
Strand = Plus / Plus
Query: 1 atgacaatcaacctccgtcacgagctaatcttcaacagctacaaaaccgtcgacgggcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atgacaatcaacctccgtcacgagctaatcttcaacagctacaaaaccgtcgacgggcgc 668
Query: 61 ggcgcgaatgtccaaatcaccggccacggctgcatcacactccaatacatctccaacgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggcgcgaatgtccaaatcaccggccacggctgcatcacactccaatacatctccaacgtg 728
Query: 121 atcatccacaacatccatgtccaccactgcaaaccctccgggaacacgaacatacgcgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atcatccacaacatccatgtccaccactgcaaaccctccgggaacacgaacatacgcgcg 788
Query: 181 agtcccacacacgttgggtggagaggcgtatcggacggcgacgggatctccatcttcggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 agtcccacacacgttgggtggagaggcgtatcggacggcgacgggatctccatcttcggc 848
Query: 241 gctcggaacatctggatcgaccattgctcgttgtcgtactgcgccgatgggttgattgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gctcggaacatctggatcgaccattgctcgttgtcgtactgcgccgatgggttgattgat 908
Query: 301 gcgataatgggatcgacggcgataacgatttcgaacaaccattttgctcaccatgatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 gcgataatgggatcgacggcgataacgatttcgaacaaccattttgctcaccatgatgag 968
Query: 361 gtgatgctgcttgggcacaatgataagtatacgccggataggggaatgcaggtgacgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 gtgatgctgcttgggcacaatgataagtatacgccggataggggaatgcaggtgacgatt 1028
Query: 421 gcgttcaaccattttg 436
||||||||||||||||
Sbjct: 1029 gcgttcaaccattttg 1044
>gnl|LJGI|TC65970 similar to UniRef100_Q2Z1Y4 Cluster: Pectate lyase; n=1; Prunus
mume|Rep: Pectate lyase - Prunus mume (Japanese flowering
apricot), partial (92%)
Length = 1915
Score = 99.6 bits (50), Expect = 3e-20
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 455 gaatgccaaggtgtaggctcggttatattcatgtggtgaacaatgatttcacgcagtggg 514
||||||||||||||||||| || || | ||||||||||||||||| | ||| || ||||
Sbjct: 910 gaatgccaaggtgtaggcttggatacttccatgtggtgaacaatgactacactcactggg 969
Query: 515 agatgtatgccatcggcggcagcgctaaccccaccatcaacagcca 560
| ||||||||||| || || || |||||||||||||||||||||||
Sbjct: 970 aaatgtatgccattggaggaagtgctaaccccaccatcaacagcca 1015
>gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 697
Score = 91.7 bits (46), Expect = 8e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 493 aacaatgatttcacgcagtgggagatgtatgccatcggcggcagcgctaaccccaccatc 552
|||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 56 aacaatgagttcacccagtgggagatgtacgccatcggcggcagcgggaaccccaccata 115
Query: 553 aacagccagggtaaccgttata 574
|| |||||||| ||||| ||||
Sbjct: 116 aatagccaggggaaccgatata 137
>gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria
x ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (40%)
Length = 1173
Score = 77.8 bits (39), Expect = 1e-13
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 455 gaatgccaaggtgtaggctcggttatattcatgtggtgaacaatgatttcacgcagtggg 514
|||||||| ||||||| | || ||| | ||||||||||||||||| | ||| || ||||
Sbjct: 75 gaatgccacggtgtagacatggatatttccatgtggtgaacaatgactacactcactggg 134
Query: 515 agatgtatgccatcggcggcagcgctaaccccaccatcaacagccagggtaaccg 569
|||||||||| || || || || | ||||||||| |||||||||||||| |||||
Sbjct: 135 agatgtatgctattggtggaagtggtaaccccactatcaacagccagggcaaccg 189
>gnl|LJGI|TC61678 similar to UniRef100_Q2Z1Y4 Cluster: Pectate lyase; n=1; Prunus
mume|Rep: Pectate lyase - Prunus mume (Japanese flowering
apricot), partial (96%)
Length = 1633
Score = 77.8 bits (39), Expect = 1e-13
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 406 atgcaggtgacgattgcgttcaaccattttggtgctggtttggtgcagcgaatgccaagg 465
|||||||| || ||||| || ||||| ||||||| ||| | || || |||||||||||
Sbjct: 864 atgcaggtcaccattgcttttaaccactttggtgaaggtcttgttcaaagaatgccaagg 923
Query: 466 tgtaggctcggttatattcatgtggtgaacaatgatttcacgcagtgggagatgtatgcc 525
|| |||| || ||| ||||||||||||||||||| | || || ||||| ||||||||
Sbjct: 924 tgcaggcatggatattttcatgtggtgaacaatgactatacccactgggaaatgtatgct 983
Query: 526 atcggcggcagcgctaaccccaccatcaacagcca 560
|| || || || ||||||||||||||||| |||||
Sbjct: 984 attggaggaagtgctaaccccaccatcaatagcca 1018
>gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria
x ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (57%)
Length = 1331
Score = 75.8 bits (38), Expect = 5e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 484 catgtggtgaacaatgatttcacgcagtgggagatgtatgccatcggcggcagcgctaac 543
||||||||||||||||| | ||| || |||||||||||||| || || || || | ||||
Sbjct: 297 catgtggtgaacaatgactacactcactgggagatgtatgctattggtggaagtggtaac 356
Query: 544 cccaccatcaacagccagggtaaccg 569
||||| |||||||||||||| |||||
Sbjct: 357 cccactatcaacagccagggcaaccg 382
>gnl|LJGI|TC74491 similar to UniRef100_Q9M505 Cluster: Pectate lyase; n=1; Vitis
vinifera|Rep: Pectate lyase - Vitis vinifera (Grape),
partial (62%)
Length = 899
Score = 73.8 bits (37), Expect = 2e-12
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 455 gaatgccaaggtgtaggctcggttatattcatgtggtgaacaatgatttcacgcagtggg 514
|||||||||||||||| | || || ||||||||||||||||||| | ||| || ||||
Sbjct: 388 gaatgccaaggtgtagacatggatactttcatgtggtgaacaatgactacacacactggg 447
Query: 515 agatgtatgccatcggcggcagcgctaaccccaccatcaacagccaggg 563
| |||||||| || || || || |||||||| || ||||||||||||||
Sbjct: 448 aaatgtatgcaattggtgggagtgctaaccctactatcaacagccaggg 496