Miyakogusa Predicted Gene
- Lj5g3v2220300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2220300.1 Non Chatacterized Hit- tr|I1LEZ5|I1LEZ5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,68.43,0,SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY
SUBUNIT B,NULL; SERINE/THREONINE PROTEIN P,CUFF.56949.1
(1374 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71041 weakly similar to UniRef100_Q8LF36 Cluster: Ser... 846 0.0
gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome... 94 3e-18
>gnl|LJGI|TC71041 weakly similar to UniRef100_Q8LF36 Cluster: Serine/threonine
protein phosphatase 2A 57 kDa regulatory subunit B'
theta isoform; n=2; Arabidopsis thaliana|Rep:
Serine/threonine protein phosphatase 2A 57 kDa
regulatory subunit B' theta isoform - Arabidopsis
thaliana (Mouse-ear cress), partial (18%)
Length = 768
Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus
Query: 154 cgagaaacccccgccacccaacgccccgccctcctcctccgcaaaatccagctctgccgc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cgagaaacccccgccacccaacgccccgccctcctcctccgcaaaatccagctctgccgc 401
Query: 214 tccatctgcgacttctcacacgccctcaaatccctcgccgagaaggaaatcaaacgccaa 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tccatctgcgacttctcacacgccctcaaatccctcgccgagaaggaaatcaaacgccaa 461
Query: 274 acactcaacgagctcatcgacacgctccaatctgactccgccgccgcatcgttcgccgaa 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acactcaacgagctcatcgacacgctccaatctgactccgccgccgcatcgttcgccgaa 521
Query: 334 tcgcaagaagatcttatctccatggtctccgtcaacatcttccgctgccttcctccgtcg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcgcaagaagatcttatctccatggtctccgtcaacatcttccgctgccttcctccgtcg 581
Query: 394 gcgcgcggcagctccgacaccgcagatcccgaagacgaaggcgatacctatctagatcca 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gcgcgcggcagctccgacaccgcagatcccgaagacgaaggcgatacctatctagatcca 641
Query: 454 tcatggccacacctgcagcttgtctacgagatcctctaccgctacgttgtttcaccggaa 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcatggccacacctgcagcttgtctacgagatcctctaccgctacgttgtttcaccggaa 701
Query: 514 ttcgatatcagaaccgcgaaacgctacgtcgatcatgtgtttgttctgaaactgcttgat 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttcgatatcagaaccgcgaaacgctacgtcgatcatgtgtttgttctgaaactgcttgat 761
Query: 574 ctgttcg 580
|||||||
Sbjct: 762 ctgttcg 768
Score = 305 bits (154), Expect = 4e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 atgttccacaagatcataaagcgcgcgcacaagaaatcatggaaatcaccattccctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgttccacaagatcataaagcgcgcgcacaagaaatcatggaaatcaccattccctgaa 191
Query: 61 atccccaccaacggccaccaattctacgaagtcgttgtcaagcacgcttcacgcgcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atccccaccaacggccaccaattctacgaagtcgttgtcaagcacgcttcacgcgcctcc 251
Query: 121 gccaccggcaacaccgagccggaaaaccatcctc 154
||||||||||||||||||||||||||||||||||
Sbjct: 252 gccaccggcaacaccgagccggaaaaccatcctc 285
>gnl|LJGI|TC68584 similar to UniRef100_A7PHZ0 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 2025
Score = 93.7 bits (47), Expect = 3e-18
Identities = 200/251 (79%)
Strand = Plus / Plus
Query: 553 tttgttctgaaactgcttgatctgttcgattcggaggatcagcgtgagcgtgagtatttg 612
||||| || ||| |||||||| |||| || || ||||| | | | |||||||||||||||
Sbjct: 860 tttgtgctcaaattgcttgatttgtttgactctgaggacccgagagagcgtgagtatttg 919
Query: 613 aagagcattctccatcgtatctatggaaaattcatggtgcataggccattcataaggaaa 672
|||| |||||| |||||||| ||||| || |||||||| || || || ||||| |||||
Sbjct: 920 aagaccattctgcatcgtatatatggcaagttcatggttcacagacccttcatcaggaag 979
Query: 673 gccatcaatgacatattctacaggttcatatttgagacgcagaggcataatgggatcagc 732
||||| || |||| || || |||| |||| |||||| |||| || | || || |
Sbjct: 980 gccattaacaacatcttttatcggtttatatatgagaccgagagacacagcggtattggg 1039
Query: 733 gagttgctggagattctggcgagtatcatcaatggttttgctctgcctatgaaggaggag 792
||| | ||||||||||| | ||| ||||| ||||| ||||| |||| ||||||||||||
Sbjct: 1040 gagcttctggagattcttgggagcatcattaatggatttgcattgcccatgaaggaggag 1099
Query: 793 cacaagttgtt 803
|||||||||||
Sbjct: 1100 cacaagttgtt 1110
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 932 tgttgaagtattggcccgtcacgaattgccagaaggaggt 971
|||||||||||||||| |||| |||||||||||||||||
Sbjct: 1239 tgttgaagtattggcctctcactaattgccagaaggaggt 1278