Miyakogusa Predicted Gene
- Lj5g3v2217220.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2217220.2 Non Chatacterized Hit- tr|I3S0W8|I3S0W8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.69,0,seg,NULL;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised protein family
UPF0016; UPF0016,Unchar,CUFF.57090.2
(693 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60036 similar to UniRef100_A7P349 Cluster: Chromosome... 785 0.0
gnl|LJGI|FS345484 similar to UniRef100_A9SWY0 Cluster: Predicted... 76 3e-13
>gnl|LJGI|TC60036 similar to UniRef100_A7P349 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1211
Score = 785 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Plus
Query: 1 atgacctcgattgttcagggtttcaccaagtccctggccatgaccgttctctctgagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgacctcgattgttcagggtttcaccaagtccctggccatgaccgttctctctgagatt 157
Query: 61 ggtgataaaactttcttcgcagctgcgatactggctatgcgccatcctcgacgacttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggtgataaaactttcttcgcagctgcgatactggctatgcgccatcctcgacgacttgtc 217
Query: 121 ttatccggctgcctatcggctttgattgtgatgaccattctctctgctcttgttggctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttatccggctgcctatcggctttgattgtgatgaccattctctctgctcttgttggctgg 277
Query: 181 gctgctcctaatctggtctctcgtacatggactcatcatattacaacattcttattcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gctgctcctaatctggtctctcgtacatggactcatcatattacaacattcttattcttg 337
Query: 241 gggtttgggctttggtccttgaaagaggctatatttgaacaaggggatgcagaggatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gggtttgggctttggtccttgaaagaggctatatttgaacaaggggatgcagaggatttg 397
Query: 301 gctgaagttgaagctgaattggacaaaaattggaaggctaaaaatggagcttcaaaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gctgaagttgaagctgaattggacaaaaattggaaggctaaaaatggagcttcaaaagat 457
Query: 361 accaataaggctgatgatgacaagaaaaagaataaccggt 400
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agcaataaggctgatgatgacaagaaaaagaataaccggt 497
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 460 ggtgaatggggtgacaagagccagctggctaccataggtttggctgcggatgagaaccca 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtgaatggggtgacaagagccagctggctaccataggtttggctgcggatgagaaccca 616
Query: 520 tttggtgtggttcttggagggattctggcgcaaacattatgcactactgctgctgttatg 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttggtgtggttcttggagggattctggcgcaaacattatgcactactgctgctgttatg 676
Query: 580 ggaggaaagagtttagcttctcagatatctgaaaaagtggttgcgctctcaggtggagtt 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaggaaagagtttagcttctcagatatctgaaaaagtggttgcgctctcaggtggagtt 736
Query: 640 cttttcattgtttttggtatccagtcgttcctttctccggtcgaatcatgaagg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cttttcattgtttttggtatccagtcgttcctttctccggtcgaatcatgaagg 790
>gnl|LJGI|FS345484 similar to UniRef100_A9SWY0 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(6%)
Length = 563
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 148 gtgatgaccattctctctgctcttgttggctgggctgctcctaatctggt 197
|||| |||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 450 gtgaggaccattctctctgctcttgttggctggactgctccgaatctggt 401