Miyakogusa Predicted Gene
- Lj5g3v2183890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2183890.1 Non Chatacterized Hit- tr|I3S518|I3S518_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal
proteins L15p and L18e,Ribosomal protein L18e/L15P; rplO_bact:
ribosomal protein L15,Ribos,CUFF.56936.1
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71402 similar to UniRef100_P31165 Cluster: 50S riboso... 1231 0.0
gnl|LJGI|TC67889 similar to UniRef100_P25873 Cluster: 50S riboso... 1104 0.0
gnl|LJGI|BP040608 similar to UniRef100_P31165 Cluster: 50S ribos... 1076 0.0
gnl|LJGI|AV776349 similar to UniRef100_P25873 Cluster: 50S ribos... 119 2e-26
>gnl|LJGI|TC71402 similar to UniRef100_P31165 Cluster: 50S ribosomal protein L15,
chloroplast precursor; n=1; Pisum sativum|Rep: 50S
ribosomal protein L15, chloroplast precursor - Pisum
sativum (Garden pea), partial (82%)
Length = 1171
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 1 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 132
Query: 61 ttcaagggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttcaagggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaaga 192
Query: 121 ccccgtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ccccgtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtc 252
Query: 181 ggtgtccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggtgtccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaag 312
Query: 241 agaaagggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agaaagggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggt 372
Query: 301 cagaaatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cagaaatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctg 432
Query: 361 tatcgacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatcgacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaa 492
Query: 421 tatgtccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatgtccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtg 552
Query: 481 tccttagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tccttagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagactt 612
Query: 541 cctttgaagattttgggtgaaggagaactaagtaagaagttgacagtaaaagcccgcgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cctttgaagattttgggtgaaggagaactaagtaagaagttgacagtaaaagcccgcgcc 672
Query: 601 ttttccacatcagcaaaggag 621
|||||||||||||||||||||
Sbjct: 673 ttttccacatcagcaaaggag 693
>gnl|LJGI|TC67889 similar to UniRef100_P25873 Cluster: 50S ribosomal protein L15,
chloroplast precursor; n=2; Arabidopsis thaliana|Rep:
50S ribosomal protein L15, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (68%)
Length = 1258
Score = 1104 bits (557), Expect = 0.0
Identities = 557/557 (100%)
Strand = Plus / Plus
Query: 65 agggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaagacccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaagacccc 260
Query: 125 gtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtcggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtcggtg 320
Query: 185 tccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaagagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaagagaa 380
Query: 245 agggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggtcaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggtcaga 440
Query: 305 aatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctgtatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctgtatc 500
Query: 365 gacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaatatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaatatg 560
Query: 425 tccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtgtcct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtgtcct 620
Query: 485 tagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagacttcctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagacttcctt 680
Query: 545 tgaagattttgggtgaaggagaactaagtaagaagttgacagtaaaagcccgcgcctttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaagattttgggtgaaggagaactaagtaagaagttgacagtaaaagcccgcgcctttt 740
Query: 605 ccacatcagcaaaggag 621
|||||||||||||||||
Sbjct: 741 ccacatcagcaaaggag 757
Score = 133 bits (67), Expect = 1e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 131
Query: 61 ttcaagg 67
|||||||
Sbjct: 132 ttcaagg 138
>gnl|LJGI|BP040608 similar to UniRef100_P31165 Cluster: 50S ribosomal protein L15,
chloroplast precursor; n=1; Pisum sativum|Rep: 50S
ribosomal protein L15, chloroplast precursor - Pisum
sativum (Garden pea), partial (54%)
Length = 583
Score = 1076 bits (543), Expect = 0.0
Identities = 543/543 (100%)
Strand = Plus / Plus
Query: 1 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atggtcactgcttctctgctacctgtgtcatcatggttaccacctcctctaccttctcct 100
Query: 61 ttcaagggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ttcaagggaacactgaaaaccttggaggcaaggccatgtctgaagattcagcgaccaaga 160
Query: 121 ccccgtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ccccgtgttttcgttgttacttctgcggcggctccggttagcgtgagtgcacccaatgtc 220
Query: 181 ggtgtccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ggtgtccggtttcgccttgacaatttgggacctcaacctggttcaaggaagaaggccaag 280
Query: 241 agaaagggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agaaagggtagaggtatatcagctgggcaaggagctagttgcggttttggaatgaggggt 340
Query: 301 cagaaatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagaaatctcggtctggtcctggtgttagaagaggtttcgaaggtggtcagatgccgctg 400
Query: 361 tatcgacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatcgacgaatccctaaacttagaggaattgcaggaggtatgagtgcgggattgccgaaa 460
Query: 421 tatgtccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tatgtccatgtaaatctgagggacatagaaggtgctaaatttcaggatggggacgaggtg 520
Query: 481 tccttagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tccttagagtcactgaaggagaagggtgtgattaacccatcaggaagagaaaggagactt 580
Query: 541 cct 543
|||
Sbjct: 581 cct 583
>gnl|LJGI|AV776349 similar to UniRef100_P25873 Cluster: 50S ribosomal protein L15,
chloroplast precursor; n=2; Arabidopsis thaliana|Rep:
50S ribosomal protein L15, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 486
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 542 ctttgaagattttgggtgaaggagaactaagtaagaagttgacagtaaaagcccgcgcct 601
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 486 ctttgaagattttgggtgaaggagtactaagtaagaagttgacagtcaaagcccgcgcct 427
Query: 602 tttccacatcagcaaaggag 621
|||||||||| | ||||||
Sbjct: 426 gttccacatcacctaaggag 407