Miyakogusa Predicted Gene
- Lj5g3v2182590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2182590.1 Non Chatacterized Hit- tr|C6T4P2|C6T4P2_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,46.4,9e-19,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; C2H2 and C2HC zinc
fingers,NULL; no description,Zinc finger C2,CUFF.56887.1
(907 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW615163 similar to UniRef100_A7PAS9 Cluster: Chromosom... 783 0.0
gnl|LJGI|TC58144 similar to UniRef100_A7PAS9 Cluster: Chromosome... 190 1e-47
gnl|LJGI|TC59999 similar to UniRef100_A7PMG0 Cluster: Chromosome... 60 3e-08
>gnl|LJGI|BW615163 similar to UniRef100_A7PAS9 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 469
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 82 atcatcaattcaaagctcaaaccacttcccatggattaccaacatgactacaaaactaaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atcatcaattcaaagctcaaaccacttcccatggattaccaacatgactacaaaactaaa 134
Query: 142 acaacaaaccccacttccccaactcccctaaagctctttggattcaacgtccatgaagaa 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 acaacaaaccccacttccccaactcccctaaagctctttggattcaacgtccatgaagaa 194
Query: 202 gaacaacaagaggcggtgcatgaagattttactgactcaaccaccaagacagcttcctct 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaacaacaagaggcggtgcatgaagattttactgactcaaccaccaagacagcttcctct 254
Query: 262 acttccccatctggctccccggactccggcggcgtcgacggcgccttcccaccttcctcc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acttccccatctggctccccggactccggcggcgtcgacggcgccttcccaccttcctcc 314
Query: 322 ggggaccggaaattcgagtgccagtactgcggcagagagtttgcaaattcacaagcactt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggggaccggaaattcgagtgccagtactgcggcagagagtttgcaaattcacaagcactt 374
Query: 382 ggtgggcatcagaacgcgcacaagaaagagcggcagcaactcaagcgtgcccagttacaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggtgggcatcagaacgcgcacaagaaagagcggcagcaactcaagcgtgcccagttacaa 434
Query: 442 gccacgcggaacgccgccgcatcattcgctcgaaa 476
|||||||||||||||||||||||||||||||||||
Sbjct: 435 gccacgcggaacgccgccgcatcattcgctcgaaa 469
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 16 atcttgtctcacactttcactataataaataactacc 52
|||||||||||||||||||||||||||||||||||||
Sbjct: 9 atcttgtctcacactttcactataataaataactacc 45
>gnl|LJGI|TC58144 similar to UniRef100_A7PAS9 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1028
Score = 190 bits (96), Expect = 1e-47
Identities = 171/196 (87%)
Strand = Plus / Plus
Query: 317 cctccggggaccggaaattcgagtgccagtactgcggcagagagtttgcaaattcacaag 376
||||||| |||||||||| |||||||||||||||| || ||||||||||||| || ||||
Sbjct: 300 cctccggcgaccggaaatacgagtgccagtactgctgccgagagtttgcaaactcccaag 359
Query: 377 cacttggtgggcatcagaacgcgcacaagaaagagcggcagcaactcaagcgtgcccagt 436
| || || || || ||||||||||||||||||||||| ||||| |||||||| || |||
Sbjct: 360 ccctcggcggccaccagaacgcgcacaagaaagagcgccagcagctcaagcgcgcgcagc 419
Query: 437 tacaagccacgcggaacgccgccgcatcattcgctcgaaaccccatcatctccgccttca 496
|||||||||||||||||||||||| ||| |||| || ||||| |||||||||||||||
Sbjct: 420 tacaagccacgcggaacgccgccgtatccttcgtccggaacccgatcatctccgccttcg 479
Query: 497 ccccaccgccgcacct 512
| || |||||||||||
Sbjct: 480 cgccgccgccgcacct 495
Score = 73.8 bits (37), Expect = 2e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 578 ctcctcccttccacgcgccggtttcgcacggttgtgtgttcccgccggcgaaccgtaacg 637
||||||||||||||| | |||||||||||||||| || |||||| |||||||| ||||||
Sbjct: 570 ctcctcccttccacgtgtcggtttcgcacggttgcgttttcccgtcggcgaacggtaacg 629
Query: 638 g 638
|
Sbjct: 630 g 630
>gnl|LJGI|TC59999 similar to UniRef100_A7PMG0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 815
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 361 tttgcaaattcacaagcacttggtgggcatcagaacgcgcacaagaaaga 410
||||||||||| ||||||||||||||||| || || || |||||||||||
Sbjct: 296 tttgcaaattcccaagcacttggtgggcaccaaaatgcccacaagaaaga 345