Miyakogusa Predicted Gene

Lj5g3v2179930.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2179930.2 Non Chatacterized Hit- tr|J9J224|J9J224_9SPIT
Uncharacterized protein OS=Oxytricha trifallax PE=4 SV,32.28,4e-18,no
description,Rossmann-like alpha/beta/alpha sandwich fold; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NA,CUFF.56857.2
         (990 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599760 similar to UniRef100_A7P3D8 Cluster: Chromosom...   458   e-128
gnl|LJGI|GO011978 similar to UniRef100_A7P3D8 Cluster: Chromosom...   394   e-109

>gnl|LJGI|DC599760 similar to UniRef100_A7P3D8 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 421

 Score =  458 bits (231), Expect = e-128
 Identities = 231/231 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaatgatccagttatttggcaagattccatcccaattttgtagccaacagactgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atgtcaatgatccagttatttggcaagattccatcccaattttgtagccaacagactgct 250

                                                                       
Query: 61  gaagatatggctttaatggcttataatcgagctcttaaactttcaaagccaggatccccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaagatatggctttaatggcttataatcgagctcttaaactttcaaagccaggatccccg 310

                                                                       
Query: 121 gttgttggtgtgggcttcactggttctttggcgagcagtcgtccaaagcaaggggaacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gttgttggtgtgggcttcactggttctttggcgagcagtcgtccaaagcaaggggaacac 370

                                                              
Query: 181 agattttatatgtcaacaaggacagctgaccgactttggatatcaaaagtg 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agattttatatgtcaacaaggacagctgaccgactttggatatcaaaagtg 421


>gnl|LJGI|GO011978 similar to UniRef100_A7P3D8 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 211

 Score =  394 bits (199), Expect = e-109
 Identities = 208/211 (98%)
 Strand = Plus / Plus

                                                                       
Query: 624 agatcgtgtcgagcaatttgagaaagttggaaagacggtaattatatccaatcagcctta 683
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agatcgtgtcaagcaatttgagaaagttggaaagacggtaattatatccaatcagcctta 60

                                                                       
Query: 684 tttttataagaaggctgaactttttccgggcagtgcttttgtaattggtgctgacacggc 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttttataagaaggctgaactttttccgggcagtgcttttgtaattggtgctgacacggc 120

                                                                       
Query: 744 agtgaggcttattaatcctaaatactatgatggggactacaacaagatgctgaagatact 803
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 agtgaggcttattaatcctaaatactatgatggggactacaactagatgctgaagatact 180

                                          
Query: 804 tattggttgtagagatacagggtgcactttt 834
           ||||||||||| |||||||||||||||||||
Sbjct: 181 tattggttgtatagatacagggtgcactttt 211