Miyakogusa Predicted Gene
- Lj5g3v2179650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2179650.1 Non Chatacterized Hit- tr|C0SV72|C0SV72_ARATH
Putative uncharacterized protein At2g33500 (Fragment)
,35,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; B-Box-type
zinc finger,Zinc finger, B-box; seg,NULL,CUFF.56843.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80314 weakly similar to UniRef100_A5X2R7 Cluster: SLL... 829 0.0
gnl|LJGI|FS354432 299 2e-80
>gnl|LJGI|TC80314 weakly similar to UniRef100_A5X2R7 Cluster: SLL2 protein; n=1;
Primula vulgaris|Rep: SLL2 protein - Primula vulgaris,
partial (20%)
Length = 724
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 1 atggaaaaggtttgtgaattctgctcagctttgaggccccttgtttactgtaagtctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggaaaaggtttgtgaattctgctcagctttgaggccccttgtttactgtaagtctgat 366
Query: 61 gaagcatatctttgtctgtcctgcgatgcgaaggtccatttggcaaatgcattgtccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaagcatatctttgtctgtcctgcgatgcgaaggtccatttggcaaatgcattgtccggc 426
Query: 121 cgacacctccggacccttgtgtgtaactcgtgcagataccatcttgcttatgttcggtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cgacacctccggacccttgtgtgtaactcgtgcagataccatcttgcttatgttcggtgc 486
Query: 181 ttggagcacaaaatgttaatctgtcgagactgtgatcaaaagatgcatgatgtttcttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttggagcacaaaatgttaatctgtcgagactgtgatcaaaagatgcatgatgtttcttta 546
Query: 241 ccgcatcataggcgacctatcagatcttttatgggtttcccttctgccagagactttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccgcatcataggcgacctatcagatcttttatgggtttcccttctgccagagactttgca 606
Query: 301 gcactctggggttttgaattgaatgagattgaaaacagtgccaatcaggaccagtttgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcactctggggttttgaattgaatgagattgaaaacagtgccaatcaggaccagtttgca 666
Query: 361 tctagttcttctgtttctgcacatttgaatgttgtacaagtttcaggaaagcctgaca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tctagttcttctgtttctgcacatttgaatgttgtacaagtttcaggaaagcctgaca 724
>gnl|LJGI|FS354432
Length = 594
Score = 299 bits (151), Expect = 2e-80
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 990 tttagagaaggatatgtcagtcgataagtcagatatcttcaatacaagtgcaatggagga 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tttagagaaggatatgtcagtcgataagtcagatatcttcaatacaagtgcaatggagga 535
Query: 1050 ctcttcggcagctgcatccgttactatttcgcactctgatcatgagaacaaggatatgaa 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ctcttcggcagctgcatccgttactatttcgcactctgatcatgagaacaaggatatgaa 475
Query: 1110 tcctctcaaccagtacaatctaagaagcagg 1140
|||||||||||||||||||||||||||||||
Sbjct: 474 tcctctcaaccagtacaatctaagaagcagg 444