Miyakogusa Predicted Gene
- Lj5g3v2179600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2179600.1 Non Chatacterized Hit- tr|Q5RFT2|Q5RFT2_PONAB
Putative uncharacterized protein DKFZp469I134
OS=Pongo,51.72,1e-18,ZF_C3H1,Zinc finger, CCCH-type; coiled-coil,NULL;
CCCH zinc finger,NULL; zf-CCCH,Zinc finger, CCCH-t,CUFF.56838.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596794 676 0.0
gnl|LJGI|AV772854 homologue to UniRef100_A7P3F0 Cluster: Chromos... 337 9e-92
>gnl|LJGI|DC596794
Length = 362
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Plus
Query: 1 atgcaaatgcataacaagaacgcttgctcaccgtcctccaacggcggtggattccgcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atgcaaatgcataacaagaacgcttgctcaccgtcctccaacggcggtggattccgcacc 81
Query: 61 gccaccaccgccggctccttcgcttccatgtacgactacgagaagctcccgtcgctgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gccaccaccgccggctccttcgcttccatgtacgactacgagaagctcccgtcgctgtca 141
Query: 121 ggaaactccagcggcgcttcgctttacccgtacaccggctctgctgctcagtacgactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggaaactccagcggcgcttcgctttacccgtacaccggctctgctgctcagtacgactct 201
Query: 181 tgcttcatccagaagcagcaggacatggtgaatcgccacaacatgtgcctcactcgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgcttcatccagaagcagcaggacatggtgaatcgccacaacatgtgcctcactcgcctc 261
Query: 241 ctggaaacttcgaaggaggttgaggctctgcaacaagagaacggccagctccgtgccgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctggaaacttcgaaggaggttgaggctctgcaacaagagaacggccagctccgtgccgtg 321
Query: 301 aacaacgagttgcagaagcagttggatcagatcgtcattca 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aacaacgagttgcagaagcagttggatcagatcgtcattca 362
>gnl|LJGI|AV772854 homologue to UniRef100_A7P3F0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 494
Score = 337 bits (170), Expect = 9e-92
Identities = 173/174 (99%)
Strand = Plus / Minus
Query: 901 ggggagcttcgcccagtgatccgccacccacgctataaaacagaggtctgcaggatggtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggggagcttcgcccagtgatccgccacccacgctataaaacagaggtctgcaggatggtg 435
Query: 961 ctgtctggggttgtgtgcccatatggccataggtgccatttccgccacgcacttactgaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgtctggggttgtgtgcccatatggccataggtgccatttccgccacgcacttactgaa 375
Query: 1021 caagagaaagctgtttcacagtctaagcccagaacaaccaaaatggaaagatga 1074
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 374 caagagaaagctgtttcacagtctaagcccagaaccaccaaaatggaaagatga 321