Miyakogusa Predicted Gene

Lj5g3v2169580.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2169580.1 Non Chatacterized Hit- tr|I1HCP5|I1HCP5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,37.93,5e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.56840.1
         (594 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80199 similar to UniRef100_A7P3F6 Cluster: Chromosome...  1003   0.0  

>gnl|LJGI|TC80199 similar to UniRef100_A7P3F6 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 1470

 Score = 1003 bits (506), Expect = 0.0
 Identities = 506/506 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcagaatggttccttcgaccaccgccctcgtgcggcgtccaacggagaagcagcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  atgtctcagaatggttccttcgaccaccgccctcgtgcggcgtccaacggagaagcagcg 139

                                                                       
Query: 61  gcggcggtggctggtggttccaacacgctccgtgcgagccccaaacgagaccacaagcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gcggcggtggctggtggttccaacacgctccgtgcgagccccaaacgagaccacaagcca 199

                                                                       
Query: 121 gacaactacgaagaccttcaattggacttcaaccctctcgtcttgagctccctcgagcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gacaactacgaagaccttcaattggacttcaaccctctcgtcttgagctccctcgagcgt 259

                                                                       
Query: 181 tatcttcctcttcacatgctcaacatgtcacgagacagcaaggctcagtacatgaggaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatcttcctcttcacatgctcaacatgtcacgagacagcaaggctcagtacatgaggaac 319

                                                                       
Query: 241 atcctcctccgatatttacctgacactgaacgcgttcggattcaaaagcacaaggaatac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcctcctccgatatttacctgacactgaacgcgttcggattcaaaagcacaaggaatac 379

                                                                       
Query: 301 aggcaaaatatcatattgaattatccaccgctacataaggagatatatactatgcattct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggcaaaatatcatattgaattatccaccgctacataaggagatatatactatgcattct 439

                                                                       
Query: 361 gaaaacttttttgtgccctcatttcttcaagcaattaaagaaaatacaaaagctggtttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaaacttttttgtgccctcatttcttcaagcaattaaagaaaatacaaaagctggtttt 499

                                                                       
Query: 421 agaagtgtaatggctgagccctccagagggatttatacgtttgcaatgcttcaaccacag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaagtgtaatggctgagccctccagagggatttatacgtttgcaatgcttcaaccacag 559

                                     
Query: 481 ttttgtgaaatgttggtatcggaggt 506
           ||||||||||||||||||||||||||
Sbjct: 560 ttttgtgaaatgttggtatcggaggt 585