Miyakogusa Predicted Gene
- Lj5g3v2169560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2169560.1 Non Chatacterized Hit- tr|I1NFR4|I1NFR4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.27,0,SUBFAMILY NOT
NAMED,NULL; ATP-DEPENDENT RNA HELICASE,NULL; HA2,Helicase-associated
domain; OB_NTP_bi,CUFF.56833.1
(3468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318755 similar to UniRef100_A7P3F8 Cluster: Chromosom... 1610 0.0
gnl|LJGI|FS345686 similar to UniRef100_A7P3F8 Cluster: Chromosom... 1261 0.0
gnl|LJGI|DC598572 644 0.0
gnl|LJGI|TC57832 similar to UniRef100_UPI0000197023 Cluster: hel... 170 4e-41
gnl|LJGI|AV407363 homologue to UniRef100_A7QXE2 Cluster: Chromos... 64 6e-09
>gnl|LJGI|FS318755 similar to UniRef100_A7P3F8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 812
Score = 1610 bits (812), Expect = 0.0
Identities = 812/812 (100%)
Strand = Plus / Plus
Query: 1407 tagaacttattttttggagaacattctcgaaatgacgggctatagattgactccttataa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagaacttattttttggagaacattctcgaaatgacgggctatagattgactccttataa 60
Query: 1467 tcaaattgatgattatggtcaagaaaggatgtggaaaatgaacaaacaggctccaagaaa 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaattgatgattatggtcaagaaaggatgtggaaaatgaacaaacaggctccaagaaa 120
Query: 1527 gaggaaaagccaaattgcttccactgtagaggatgcaattagagctgctgatttcaaaga 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggaaaagccaaattgcttccactgtagaggatgcaattagagctgctgatttcaaaga 180
Query: 1587 ttacagcccacagacacaggaatctttgtcatgttggaatccagactgtataggttttag 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttacagcccacagacacaggaatctttgtcatgttggaatccagactgtataggttttag 240
Query: 1647 tctcattgaatatatcttatgcaatatttgtgaaaatgaaaggcctggtgctgttttggt 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctcattgaatatatcttatgcaatatttgtgaaaatgaaaggcctggtgctgttttggt 300
Query: 1707 tttcatgactggatgggatgatataagctctctgaaagagaagctcctgagaaataatgt 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttcatgactggatgggatgatataagctctctgaaagagaagctcctgagaaataatgt 360
Query: 1767 attgggagatccaaatcgtgttttgttgcttgcatgtcatggctcaatggctagttctga 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgggagatccaaatcgtgttttgttgcttgcatgtcatggctcaatggctagttctga 420
Query: 1827 gcagaggttaatattcgaagagcctgaagatggagttagaaaaatagtgctcgcaacaaa 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcagaggttaatattcgaagagcctgaagatggagttagaaaaatagtgctcgcaacaaa 480
Query: 1887 tattgctgaaacgagtatcacaatcaatgatgttgtttttgttctagactgcggaaaggc 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tattgctgaaacgagtatcacaatcaatgatgttgtttttgttctagactgcggaaaggc 540
Query: 1947 aaaagaaacatcatatgatgcactgaataacacgccttgtttgcttcctacatggatctc 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaagaaacatcatatgatgcactgaataacacgccttgtttgcttcctacatggatctc 600
Query: 2007 taaggtttctgctcaacaaagaagaggaagagctggtcgcgttcaaccgggagagtgtta 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaggtttctgctcaacaaagaagaggaagagctggtcgcgttcaaccgggagagtgtta 660
Query: 2067 ccatctctatcctagatgcgtatatgatgcttttgcagagtatcaattgccagaaatttt 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccatctctatcctagatgcgtatatgatgcttttgcagagtatcaattgccagaaatttt 720
Query: 2127 gagaacaccactgcaatctctctgtttacaaatcaaaagtttaagacttggaagtatatc 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagaacaccactgcaatctctctgtttacaaatcaaaagtttaagacttggaagtatatc 780
Query: 2187 tgagttcttgtctagggctctgcagtctcctg 2218
||||||||||||||||||||||||||||||||
Sbjct: 781 tgagttcttgtctagggctctgcagtctcctg 812
>gnl|LJGI|FS345686 similar to UniRef100_A7P3F8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 731
Score = 1261 bits (636), Expect = 0.0
Identities = 636/636 (100%)
Strand = Plus / Minus
Query: 2816 actcggtgaatgctcgggaaactacaattccaagtccatggctagtttttaatgagaaga 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 actcggtgaatgctcgggaaactacaattccaagtccatggctagtttttaatgagaaga 672
Query: 2876 taaaagtgaactcagtttttctccgtgactcaacagctgtgtccgactcagtggtgcttc 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 taaaagtgaactcagtttttctccgtgactcaacagctgtgtccgactcagtggtgcttc 612
Query: 2936 tctttgggggaaacttgtcaaaaggagatgccgataatcacttaaaaatgttaggaggat 2995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tctttgggggaaacttgtcaaaaggagatgccgataatcacttaaaaatgttaggaggat 552
Query: 2996 atctggagtttttcatggaacctgatgttgctgacatgtacctgagtataaggagagaac 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atctggagtttttcatggaacctgatgttgctgacatgtacctgagtataaggagagaac 492
Query: 3056 ttgatgacttcattcagagcaaactactttttcccagaatgggtatgcacttgtatcatg 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttgatgacttcattcagagcaaactactttttcccagaatgggtatgcacttgtatcatg 432
Query: 3116 agctcctatcagcggtacggttgttgatttccaatgacgagtgtgaaggaagatttgttt 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agctcctatcagcggtacggttgttgatttccaatgacgagtgtgaaggaagatttgttt 372
Query: 3176 ttggtcgcccggttcttaaaacattaaagaaatctgttatggtctcacgtccagcattgt 3235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttggtcgcccggttcttaaaacattaaagaaatctgttatggtctcacgtccagcattgt 312
Query: 3236 tttcaaggattgagagcggacctgggggtgaaaattccaaaagtcagctccaaaccttgc 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttcaaggattgagagcggacctgggggtgaaaattccaaaagtcagctccaaaccttgc 252
Query: 3296 ttgcaagagcaggatatgctaaacccttctacaagactgaacagttaatgaacagccagt 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgcaagagcaggatatgctaaacccttctacaagactgaacagttaatgaacagccagt 192
Query: 3356 ttcaggctactgtcgagttcaatggaatgcagataataggcctaccttgtaataataaga 3415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttcaggctactgtcgagttcaatggaatgcagataataggcctaccttgtaataataaga 132
Query: 3416 agagtgcagaaaaagccgccgcagctgaggcgctgc 3451
||||||||||||||||||||||||||||||||||||
Sbjct: 131 agagtgcagaaaaagccgccgcagctgaggcgctgc 96
>gnl|LJGI|DC598572
Length = 545
Score = 644 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Plus
Query: 164 tttcccctaagctcacacaaaaccctaccccccttaaaaccccgtttctcgagcaagctc 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tttcccctaagctcacacaaaaccctaccccccttaaaaccccgtttctcgagcaagctc 276
Query: 224 ctaacaacacgaactcgcgcttcgtttctgcttacgacgacgtcgtttccgatgattgtt 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctaacaacacgaactcgcgcttcgtttctgcttacgacgacgtcgtttccgatgattgtt 336
Query: 284 tcgatcgtgaatttcagattccactcccttcatcactaccgagtgatttccccaatgata 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcgatcgtgaatttcagattccactcccttcatcactaccgagtgatttccccaatgata 396
Query: 344 acattgctgagtggaagaggaaactaagcatgctcttaaatgacaagagtaagcaggagg 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acattgctgagtggaagaggaaactaagcatgctcttaaatgacaagagtaagcaggagg 456
Query: 404 tgatttcgcgggagaaaaaggataggcatgatttcgagcaaatagcggttttggcgaccg 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgatttcgcgggagaaaaaggataggcatgatttcgagcaaatagcggttttggcgaccg 516
Query: 464 aaatgggattgtatagccataagtacacg 492
| |||||||||||||||||||||||||||
Sbjct: 517 atatgggattgtatagccataagtacacg 545
Score = 188 bits (95), Expect = 2e-46
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 atgctccccactccgcaacccacttccttcccaaacctctcttctcacctcccctttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atgctccccactccgcaacccacttccttcccaaacctctcttctcacctcccctttctc 113
Query: 61 cccatgaaggaccgcccctatggcgccgtttacgt 95
|||||||||||||||||||||||||||||||||||
Sbjct: 114 cccatgaaggaccgcccctatggcgccgtttacgt 148
>gnl|LJGI|TC57832 similar to UniRef100_UPI0000197023 Cluster: helicase
domain-containing protein; n=1; Arabidopsis thaliana|Rep:
helicase domain-containing protein - Arabidopsis
thaliana, partial (23%)
Length = 828
Score = 170 bits (86), Expect = 4e-41
Identities = 452/574 (78%)
Strand = Plus / Plus
Query: 1795 cttgcatgtcatggctcaatggctagttctgagcagaggttaatattcgaagagcctgaa 1854
|||||||| ||||| || ||||| ||| ||||||||| ||| ||||| ||| | || |||
Sbjct: 246 cttgcatgccatggttctatggccagtgctgagcagaagttgatatttgaaaatccagaa 305
Query: 1855 gatggagttagaaaaatagtgctcgcaacaaatattgctgaaacgagtatcacaatcaat 1914
| || || || ||||| || || || || || || || || || ||||| || ||||||
Sbjct: 306 ggaggggtgaggaaaattgttcttgctactaacatggcagagactagtattaccatcaat 365
Query: 1915 gatgttgtttttgttctagactgcggaaaggcaaaagaaacatcatatgatgcactgaat 1974
|||||||| ||||| |||| || ||||| |||||||| ||||||||||||||| | |||
Sbjct: 366 gatgttgtctttgtggtagattgtggaaaagcaaaagagacatcatatgatgcaataaat 425
Query: 1975 aacacgccttgtttgcttcctacatggatctctaaggtttctgctcaacaaagaagagga 2034
||||| |||||||||||||| | |||||||| || | | || | | ||| |||||||||
Sbjct: 426 aacactccttgtttgcttccgtcttggatctcaaaagctgcttcgcgacagagaagagga 485
Query: 2035 agagctggtcgcgttcaaccgggagagtgttaccatctctatcctagatgcgtatatgat 2094
|| |||||||| |||||||| ||||| || |||||||| ||||| | ||| || ||||||
Sbjct: 486 agggctggtcgtgttcaacccggagaatgctaccatctttatcccaaatgtgtttatgat 545
Query: 2095 gcttttgcagagtatcaattgccagaaattttgagaacaccactgcaatctctctgttta 2154
|||||||| || |||||||||||||| |||| |||||||| |||| || | ||| |
Sbjct: 546 gcttttgctgattatcaattgccagagcttttaagaacacctttgcagtccttatgtctg 605
Query: 2155 caaatcaaaagtttaagacttggaagtatatctgagttcttgtctagggctctgcagtct 2214
||||| |||| | || ||||||||| || |||||||| || || || ||| |||||
Sbjct: 606 caaattaaaactctacaacttggaagcatctctgagtttttatccagagctttgcagcag 665
Query: 2215 cctgagatccttgcggtacaaaatgcagttgaatatttagaaataattggtgctttggat 2274
|| ||| || |||| |||||||| |||||||||| | | ||||| || || |||
Sbjct: 666 ccagagcctctctcggttcaaaatgctattgaatatttgaagactattggagccttagat 725
Query: 2275 gagagtgagaatctgactattctagggcgctatctagctatgctgcctatggaacccaaa 2334
|||| ||| ||| |||| ||||||||| | | | | ||||| ||| | |||||||||
Sbjct: 726 gagaatgaaaatttgacagttctagggcacaagttgtcgatgcttcctgtagaacccaaa 785
Query: 2335 cttggcaagatgctcatattaggtgctatcttca 2368
||||||||||||||||| || || ||||||||||
Sbjct: 786 cttggcaagatgctcattttgggagctatcttca 819
>gnl|LJGI|AV407363 homologue to UniRef100_A7QXE2 Cluster: Chromosome undetermined
scaffold_221, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_221, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 425
Score = 63.9 bits (32), Expect = 6e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1211 taactcatgttattgtggatgaaattcatgaacgtgggatgaatgaagattt 1262
|||| |||||| ||||||||||||||||||| || || ||||||||||||||
Sbjct: 235 taacccatgtttttgtggatgaaattcatgagcgaggcatgaatgaagattt 286