Miyakogusa Predicted Gene

Lj5g3v2169490.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2169490.1 CUFF.56826.1
         (1254 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78553 weakly similar to UniRef100_Q945C5 Cluster: Ori...   898   0.0  

>gnl|LJGI|TC78553 weakly similar to UniRef100_Q945C5 Cluster: Origin recognition
            complex subunit 4; n=1; Zea mays|Rep: Origin recognition
            complex subunit 4 - Zea mays (Maize), partial (33%)
          Length = 669

 Score =  898 bits (453), Expect = 0.0
 Identities = 453/453 (100%)
 Strand = Plus / Plus

                                                                        
Query: 802  aggttcctgttctgtgcagtctctcatatggatttgaagacaggatttttgtcaccggaa 861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aggttcctgttctgtgcagtctctcatatggatttgaagacaggatttttgtcaccggaa 60

                                                                        
Query: 862  aactttgaaactgcattttcaagtatccagaggcagcccaaactagaatgtttaaaaagt 921
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aactttgaaactgcattttcaagtatccagaggcagcccaaactagaatgtttaaaaagt 120

                                                                        
Query: 922  tgctccatcttagaactttatattttggtttgcatgaagagattggaagttaaagagcaa 981
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgctccatcttagaactttatattttggtttgcatgaagagattggaagttaaagagcaa 180

                                                                        
Query: 982  agtttatgcaacttcaatgctgtaatgaaagagtataaaagtgtacatgattccttcaag 1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agtttatgcaacttcaatgctgtaatgaaagagtataaaagtgtacatgattccttcaag 240

                                                                        
Query: 1042 actgctgattattatgcacggaatgtctgcttaagggcatttgaacatcttatacatcgt 1101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  actgctgattattatgcacggaatgtctgcttaagggcatttgaacatcttatacatcgt 300

                                                                        
Query: 1102 gaattaatatgttacacagacaatagagggcagagtttgtctgctgaatttcgtcctgca 1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaattaatatgttacacagacaatagagggcagagtttgtctgctgaatttcgtcctgca 360

                                                                        
Query: 1162 aagcttttaatttcaccccctgaactacatcagggactaaaagcgtatccttcatgccct 1221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aagcttttaatttcaccccctgaactacatcagggactaaaagcgtatccttcatgccct 420

                                             
Query: 1222 cctatccttcaaaagttaactgcaccgtgaagg 1254
            |||||||||||||||||||||||||||||||||
Sbjct: 421  cctatccttcaaaagttaactgcaccgtgaagg 453