Miyakogusa Predicted Gene
- Lj5g3v2169440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2169440.1 tr|G7IC53|G7IC53_MEDTR Protein TRANSPARENT TESTA
OS=Medicago truncatula GN=MTR_1g108840 PE=2 SV=1,83.4,0,seg,NULL; MATE
EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL; matE:
MATE efflux fami,CUFF.56825.1
(1455 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74543 similar to UniRef100_A7P3G4 Cluster: Chromosome... 813 0.0
gnl|LJGI|TC77231 weakly similar to UniRef100_A7P3G6 Cluster: Chr... 545 e-154
gnl|LJGI|TC69708 similar to UniRef100_Q0ZBL3 Cluster: Hexokinase... 56 6e-07
gnl|LJGI|BW599623 weakly similar to UniRef100_A7P909 Cluster: Ch... 54 3e-06
gnl|LJGI|BI417549 weakly similar to UniRef100_A7QTE8 Cluster: Ch... 54 3e-06
gnl|LJGI|TC80008 weakly similar to UniRef100_UPI00005DC1DE Clust... 52 1e-05
>gnl|LJGI|TC74543 similar to UniRef100_A7P3G4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 500
Score = 813 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1 atggaagaaggtcttctagcaaaacagagggatgagaaaacagagcatgaacagcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atggaagaaggtcttctagcaaaacagagggatgagaaaacagagcatgaacagcagagc 150
Query: 61 aaagtaacatgggaaatttacggtcaagaaatgaagaggatttgccacatagcagggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aaagtaacatgggaaatttacggtcaagaaatgaagaggatttgccacatagcagggcct 210
Query: 121 atggtggcggtgatttcatcccagtatttgttgcaggttgtttcaaccatgattgttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atggtggcggtgatttcatcccagtatttgttgcaggttgtttcaaccatgattgttggt 270
Query: 181 catcttggtgagctctatctctctagcgcctccttagccatctcctttactggtgtcacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 catcttggtgagctctatctctctagcgcctccttagccatctcctttactggtgtcacg 330
Query: 241 ggtttcagttttcttatgggaatggctagtggacttgaaactatctgtggacaagcttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggtttcagttttcttatgggaatggctagtggacttgaaactatctgtggacaagcttat 390
Query: 301 ggagctcaacaatatcacagaattggaatgcaaacctacactgccatattctccctcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggagctcaacaatatcacagaattggaatgcaaacctacactgccatattctccctcata 450
Query: 361 attgtttgcattccattgtctttcatttggatcaacatagaaaatattct 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 attgtttgcattccattgtctttcatttggatcaacatagaaaatattct 500
>gnl|LJGI|TC77231 weakly similar to UniRef100_A7P3G6 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 639
Score = 545 bits (275), Expect = e-154
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 1181 cagggattgctagaggttgtggatggcaacaccttggggtttatgttaatttaggggcct 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagggattgctagaggttgtggatggcaacaccttggggtttatgttaatttaggggcct 240
Query: 1241 tttacctatgtgggattccagttgcagctgcattggcattttggataaaagtgggaggaa 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttacctatgtgggattccagttgcagctgcattggcattttggataaaagtgggaggaa 300
Query: 1301 aaggactttggattggtattcaagttggtgctcttgttcaatctgttctcctttctatca 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggactttggattggtattcaagttggtgctcttgttcaatctgttctcctttctatca 360
Query: 1361 taacatgttgcataaactgggaacaacaggcaatgaaggctagaaagaggttacgtgatg 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taacatgttgcataaactgggaacaacaggcaatgaaggctagaaagaggttacgtgatg 420
Query: 1421 atcaattttcagcagacagtagattgatataaaag 1455
|||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaattttcagcagacagtagattgatataaaag 455
>gnl|LJGI|TC69708 similar to UniRef100_Q0ZBL3 Cluster: Hexokinase 2; n=1; Fragaria x
ananassa|Rep: Hexokinase 2 - Fragaria ananassa
(Strawberry), partial (16%)
Length = 1067
Score = 56.0 bits (28), Expect = 6e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1354 tctatcataacatgttgcataaactgggaacaacag 1389
|||||||||||| |||||||||| ||||||||||||
Sbjct: 132 tctatcataacacgttgcataaattgggaacaacag 167
>gnl|LJGI|BW599623 weakly similar to UniRef100_A7P909 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 455
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1354 tctatcataacatgttgcataaactgggaacaaca 1388
|||||||||||| |||||||||| |||||||||||
Sbjct: 107 tctatcataacacgttgcataaattgggaacaaca 141
>gnl|LJGI|BI417549 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 404
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 943 agcacaagagtttcaaatgaattaggagctgggaatcca 981
||||| |||||| |||||||||| |||||||||||||||
Sbjct: 253 agcactagagttgcaaatgaattgggagctgggaatcca 291
>gnl|LJGI|TC80008 weakly similar to UniRef100_UPI00005DC1DE Cluster: MATE efflux
family protein; n=1; Arabidopsis thaliana|Rep: MATE
efflux family protein - Arabidopsis thaliana, partial
(33%)
Length = 749
Score = 52.0 bits (26), Expect = 1e-05
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 924 tggaattggtgctgcagcaagcacaagagtttcaaatgaattaggagctgggaa 977
|||| |||||||||||| ||| ||| ||||||||||||| ||||| || |||||
Sbjct: 26 tggagttggtgctgcagtaagtacacgagtttcaaatgagttaggggcagggaa 79