Miyakogusa Predicted Gene
- Lj5g3v2167330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2167330.1 Non Chatacterized Hit- tr|I1LEN6|I1LEN6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18746
PE,87.86,0,seg,NULL; coiled-coil,NULL; TPR_REGION,Tetratricopeptide
repeat-containing domain; SUBFAMILY NOT NAM,CUFF.56820.1
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS342418 similar to UniRef100_A7P3H5 Cluster: Chromosom... 1296 0.0
gnl|LJGI|TC74195 similar to UniRef100_A7P3H5 Cluster: Chromosome... 724 0.0
>gnl|LJGI|FS342418 similar to UniRef100_A7P3H5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 759
Score = 1296 bits (654), Expect = 0.0
Identities = 668/675 (98%)
Strand = Plus / Plus
Query: 35 cattatcgagaagcgcaagagctgcagaagatctctaccaccttcgagacacttttttcc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cattatcgagaagcgcaagagctgcagaagatctctaccaccttcgagacacttttttcc 144
Query: 95 cacccaaccctcatgacagaatctcgtcgttgcagcaccattccgatctcgctctcaatc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cacccaaccctcatgacagaatctcgtcgttgcagcaccattccgatctcgctctcaatc 204
Query: 155 tcctcgattccattcctccagaacaaagaaaatcaccgatgcaacgtgcaacatttgaat 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tcctcgattccattcctccagaacaaagaaaatcaccgatgcaacgtgcaacatttgaat 264
Query: 215 atcttagagggaaggtgttggatgtatttcctgactacaggaaagacgctgaggatcacc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcttagagggaaggtgttggatgtatttcctgactacaggaaagacgctgaggatcacc 324
Query: 275 tatcgaaagctgttaagttaaatccatctcttgcagatgcttggctatgtttaggtaact 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatcgaaagctgttaagttaaatccatctcttgcagatgcttggctatgtttaggtaact 384
Query: 335 gcatatggaagaagggagatttgcctgctgcaaaaaactgcctcagtcttgcattgaaca 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcatatggaagaagggagatttgcctgctgcaaaaaactgcctcagtcttgcattgaaca 444
Query: 395 agggtcctaacaaaaagattctttgtcaattatcaatgcttaaaagaaaaatgtctcaag 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agggtcctaacaaaaagattctttgtcaattatcaatgcttaaaagaaaaatgtctcaag 504
Query: 455 gtgcggagaatcagtcagaacttgttgaagaaagcattgaacatgccaaggaagcaatca 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgcggagaatcagtcagaacttgttgaagaaagcattgaacatgccaaggaagcaatca 564
Query: 515 ctttggacgtcaaggatgggaactcttggtataatcttggaaatgcataccttacaagnn 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctttggacgtcaaggatgggaactcttggtataatcttggaaatgcataccttacaagtt 624
Query: 575 nnnnngtcactggagcttgggatcatgccaaactttcacattctttaaaagcatatcaaa 634
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttttgtcactggagcttgggatcatgccaaactttcacattctttaaaagcatatcaaa 684
Query: 635 atgctgagaaagatgaaagaatgaagtccaatcctgacctatattttaattatgccaccg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgctgagaaagatgaaagaatgaagtccaatcctgacctatattttaattatgccaccg 744
Query: 695 ttaacaaatatctag 709
|||||||||||||||
Sbjct: 745 ttaacaaatatctag 759
>gnl|LJGI|TC74195 similar to UniRef100_A7P3H5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 746
Score = 724 bits (365), Expect = 0.0
Identities = 371/373 (99%)
Strand = Plus / Plus
Query: 894 atcgtcacacaaaggagttaccattgaccttctgtcagagggtctgaatagagctctagc 953
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10 atcgtcacacaaaggagttaccattgaccttctgtcgtagggtctgaatagagctctagc 69
Query: 954 agtagaggggaaggtgcttttctttgttaggagtgagagtgttgctcccctatactatgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 agtagaggggaaggtgcttttctttgttaggagtgagagtgttgctcccctatactatgt 129
Query: 1014 gctttgtgattcaaatcaaacttgctttgttctctcagtttatggtgtacgttttgatgt 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gctttgtgattcaaatcaaacttgctttgttctctcagtttatggtgtacgttttgatgt 189
Query: 1074 gattaaagaaggagatcagctaacattgctcgaccctttatttcgggatgttgatttgtc 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gattaaagaaggagatcagctaacattgctcgaccctttatttcgggatgttgatttgtc 249
Query: 1134 ttggaaggagaagcattatcagttcaagtctatacgcctggatttctatgaacaagtgct 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttggaaggagaagcattatcagttcaagtctatacgcctggatttctatgaacaagtgct 309
Query: 1194 tgttaatggaaaagctctgactcctcaacaagctatccgttcatcaatacttgcacaaca 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgttaatggaaaagctctgactcctcaacaagctatccgttcatcaatacttgcacaaca 369
Query: 1254 taaaccttgaaca 1266
|||||||||||||
Sbjct: 370 taaaccttgaaca 382