Miyakogusa Predicted Gene
- Lj5g3v2166230.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2166230.3 CUFF.56802.3
(306 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP036629 homologue to UniRef100_A5AQ60 Cluster: Peptidy... 607 e-173
gnl|LJGI|TC74763 homologue to UniRef100_A5AQ60 Cluster: Peptidyl... 480 e-135
gnl|LJGI|DC595802 454 e-127
gnl|LJGI|TC76793 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-li... 248 2e-65
gnl|LJGI|TC78523 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-li... 206 6e-53
gnl|LJGI|TC62515 similar to UniRef100_A7QM51 Cluster: Chromosome... 206 6e-53
gnl|LJGI|TC60435 similar to UniRef100_A7R4B5 Cluster: Chromosome... 206 6e-53
gnl|LJGI|TC81899 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-li... 123 7e-28
>gnl|LJGI|BP036629 homologue to UniRef100_A5AQ60 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(4%)
Length = 467
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 81
Query: 61 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 141
Query: 121 acgaccttctccatcccatcccatagacgataccaccgccgccgtttctcccttcgaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 acgaccttctccatcccatcccatagacgataccaccgccgccgtttctcccttcgaacc 201
Query: 181 cctctcgatgcccctcctgtgccccgtcgatctccgatcccgcaggtccctccgcaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cctctcgatgcccctcctgtgccccgtcgatctccgatcccgcaggtccctccgcaagaa 261
Query: 241 attatcctcctcttccttcaacagaacccaggagtatcactccttatgttatcaaataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 attatcctcctcttccttcaacagaacccaggagtatcactccttatgttatcaaataat 321
Query: 301 tggtaa 306
||||||
Sbjct: 322 tggtaa 327
>gnl|LJGI|TC74763 homologue to UniRef100_A5AQ60 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(4%)
Length = 589
Score = 480 bits (242), Expect = e-135
Identities = 260/266 (97%), Gaps = 5/266 (1%)
Strand = Plus / Plus
Query: 12 gatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacgcggaggaagct 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacgcggaggaagct 64
Query: 72 cccttggactactacagcgactacgacgacgacgccgatgattacttcaacgaccttctc 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cccttggactactacagcgactacgacgacgacgccgatgattacttcaacgaccttctc 124
Query: 132 cat-----cccatcccatagacgataccaccgccgccgtttctcccttcgaacccctctc 186
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 catcccatcccatcccatagacgataccaccgccgccgtttctcccttcgaacccctctc 184
Query: 187 gatgcccctcctgtgccccgtcgatctccgatcccgcaggtccctccgcaagaaattatc 246
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatgcccctcctgtgccccctcgatctccgatcccgcaggtccctccgcaagaaattatc 244
Query: 247 ctcctcttccttcaacagaacccagg 272
||||||||||||||||||||||||||
Sbjct: 245 ctcctcttccttcaacagaacccagg 270
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 275 tatcactccttatgttatcaaataattggtaa 306
||||||||||||||||||||||||||||||||
Sbjct: 297 tatcactccttatgttatcaaataattggtaa 328
>gnl|LJGI|DC595802
Length = 312
Score = 454 bits (229), Expect = e-127
Identities = 252/260 (96%), Gaps = 6/260 (2%)
Strand = Plus / Plus
Query: 19 acgacgtggagtccttcgacgacgatttctacagtggcgacgcggaggaagctcccttgg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgacgtggagtccttcgacgacgatttctacagtggcgacgcggaggaagctcccttgg 60
Query: 79 actactacagcgactacgacgacgacgccgatgattacttcaacgaccttctccatccca 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actactacagcgactacgacgacgacgccgatgattacttcaacgaccttctccatccca 120
Query: 139 tccca------tagacgataccaccgccgccgtttctcccttcgaacccctctcgatgcc 192
||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccatgggggtggacgataccaccgccgccgtttctcccttcgaacccctctcgatgcc 180
Query: 193 cctcctgtgccccgtcgatctccgatcccgcaggtccctccgcaagaaattatcctcctc 252
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctcctgtgccccctcgatctccgatcccgcaggtccctccgcaagaaattatcctcctc 240
Query: 253 ttccttcaacagaacccagg 272
||||||||||||||||||||
Sbjct: 241 ttccttcaacagaacccagg 260
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 275 tatcactccttatgttatcaaataat 300
||||||||||||||||||||||||||
Sbjct: 287 tatcactccttatgttatcaaataat 312
>gnl|LJGI|TC76793 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-like protein; n=1;
Musa acuminata|Rep: ARIADNE-like protein - Musa
acuminata (Banana), partial (5%)
Length = 746
Score = 248 bits (125), Expect = 2e-65
Identities = 131/133 (98%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgatatgcacgatgccaacgatgtggagtccttcgacgacgatttctacagtggcgacg 344
Query: 61 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 404
Query: 121 acgaccttctcca 133
|||||||||||||
Sbjct: 405 acgaccttctcca 417
Score = 176 bits (89), Expect = 5e-44
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 179 cccctctcgatgcccctcctgtgccccgtcgatctccgatcccgcaggtccctccgcaag 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 466 cccctctcgatgcccctcctgtgccccctcgatctccgatcccgcaggtccctccgcaag 525
Query: 239 aaattatcctcctcttccttcaacagaacccag 271
|||||||||||||||||||||||||||||||||
Sbjct: 526 aaattatcctcctcttccttcaacagaacccag 558
>gnl|LJGI|TC78523 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-like protein; n=1;
Musa acuminata|Rep: ARIADNE-like protein - Musa
acuminata (Banana), partial (5%)
Length = 488
Score = 206 bits (104), Expect = 6e-53
Identities = 119/124 (95%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 235 atgatatgcacgatgccaacgacgttgagtctttcgacgacgatttctacagtggcgacg 294
Query: 61 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 295 cggaggaagctcccttggactactacagcgactacgatgacgacgccgatgattacttcg 354
Query: 121 acga 124
||||
Sbjct: 355 acga 358
>gnl|LJGI|TC62515 similar to UniRef100_A7QM51 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 781
Score = 206 bits (104), Expect = 6e-53
Identities = 119/124 (95%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 200 atgatatgcacgatgccaacgacgttgagtctttcgacgacgatttctacagtggcgacg 259
Query: 61 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 cggaggaagctcccttggactactacagcgactacgatgacgacgccgatgattacttcg 319
Query: 121 acga 124
||||
Sbjct: 320 acga 323
>gnl|LJGI|TC60435 similar to UniRef100_A7R4B5 Cluster: Chromosome undetermined
scaffold_644, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_644,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (76%)
Length = 1542
Score = 206 bits (104), Expect = 6e-53
Identities = 119/124 (95%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 118 atgatatgcacgatgccaacgacgttgagtctttcgacgacgatttctacagtggcgacg 177
Query: 61 cggaggaagctcccttggactactacagcgactacgacgacgacgccgatgattacttca 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 178 cggaggaagctcccttggactactacagcgactacgatgacgacgccgatgattacttcg 237
Query: 121 acga 124
||||
Sbjct: 238 acga 241
>gnl|LJGI|TC81899 similar to UniRef100_Q6RZU9 Cluster: ARIADNE-like protein; n=1;
Musa acuminata|Rep: ARIADNE-like protein - Musa
acuminata (Banana), partial (28%)
Length = 743
Score = 123 bits (62), Expect = 7e-28
Identities = 112/128 (87%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 1 atgatgtgcacgatgccaacgacgtggagtccttcgacgacgatttctacagtggcgacg 60
||||| ||||||| |||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 167 atgatatgcacgacgccaacgatgtcgagtccctcgacgacgatttctacagtggcgaaa 226
Query: 61 cggaggaa---gctcccttggactactacagcgactacgacgacgacgccgatgattact 117
| || || |||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 227 ccgacgataatgctcccatggattactacagcgactacgacgacgacgccgatgattact 286
Query: 118 tcaacgac 125
|| |||||
Sbjct: 287 tcgacgac 294