Miyakogusa Predicted Gene
- Lj5g3v2166150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2166150.1 Non Chatacterized Hit- tr|I1NFU4|I1NFU4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,87.55,0,SUBFAMILY NOT
NAMED,NULL; RIBOSE-5-PHOSPHATE ISOMERASE,Ribose 5-phosphate isomerase,
type A; Rib_5P_,CUFF.56787.1
(790 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71252 similar to UniRef100_A7P3I3 Cluster: Chromosome... 1566 0.0
gnl|LJGI|AV775370 similar to UniRef100_A7Q5Y6 Cluster: Chromosom... 373 e-102
gnl|LJGI|TC74654 similar to UniRef100_A7P3I3 Cluster: Chromosome... 341 4e-93
gnl|LJGI|TC61450 similar to UniRef100_A7Q5Y6 Cluster: Chromosome... 103 2e-21
gnl|LJGI|TC78462 similar to UniRef100_A7Q5Y6 Cluster: Chromosome... 52 5e-06
gnl|LJGI|TC72661 similar to UniRef100_A7NZE2 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC71252 similar to UniRef100_A7P3I3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1269
Score = 1566 bits (790), Expect = 0.0
Identities = 790/790 (100%)
Strand = Plus / Plus
Query: 1 atggctattccctatccccatttcatctcctccgagaaagcagccatggaagcaggtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atggctattccctatccccatttcatctcctccgagaaagcagccatggaagcaggtctt 219
Query: 61 ctcgcaccatcctccatcattctcacccaagacgatttgaagaaaatcgccgcctacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ctcgcaccatcctccatcattctcacccaagacgatttgaagaaaatcgccgcctacaaa 279
Query: 121 gccgtcgagtatgtcgaatccggcatggtcctcggcctcggcaccggctccaccgccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gccgtcgagtatgtcgaatccggcatggtcctcggcctcggcaccggctccaccgccaaa 339
Query: 181 cacgccgtcgcccgaatcggtgagcttctccgccaggggaagctcaccgacatcgtcgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cacgccgtcgcccgaatcggtgagcttctccgccaggggaagctcaccgacatcgtcgga 399
Query: 241 atccccacctccaccatgactcacgaccaggctctctccgtcggaatccccttatccgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atccccacctccaccatgactcacgaccaggctctctccgtcggaatccccttatccgat 459
Query: 301 ctcgactcccaccccgtcgttgatctcgccattgacggcgccgacgaggttgatccttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctcgactcccaccccgtcgttgatctcgccattgacggcgccgacgaggttgatccttat 519
Query: 361 ctcaacctcgtcaaggggcgcggtgggtcgcttctcagggagaagatggtggaggctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctcaacctcgtcaaggggcgcggtgggtcgcttctcagggagaagatggtggaggctgca 579
Query: 421 tgcaagaagtttgtggtcattgtggatgagtccaagctcgtgaactatataggaggaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgcaagaagtttgtggtcattgtggatgagtccaagctcgtgaactatataggaggaagt 639
Query: 481 gggttggctatgcctgttgaggttattcagttttgctggaaattcactgcttcaaagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gggttggctatgcctgttgaggttattcagttttgctggaaattcactgcttcaaagctt 699
Query: 541 caatccctctttgaggaatctgggtgtgttgccaagctcagaactgttggtgagaaggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 caatccctctttgaggaatctgggtgtgttgccaagctcagaactgttggtgagaaggag 759
Query: 601 gaaccctttgtcactgacaatgggaactatattgtggatttgtatttcaaggagagtatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gaaccctttgtcactgacaatgggaactatattgtggatttgtatttcaaggagagtatt 819
Query: 661 ggtgatttgaaggctgccagtgattcaattctgcagattgctggtgttgttgagcatgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ggtgatttgaaggctgccagtgattcaattctgcagattgctggtgttgttgagcatgga 879
Query: 721 atgtttctggatatggctaccactgttattattgcaggtgaacttgggctaacggtgaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 atgtttctggatatggctaccactgttattattgcaggtgaacttgggctaacggtgaaa 939
Query: 781 aacaaatagc 790
||||||||||
Sbjct: 940 aacaaatagc 949
>gnl|LJGI|AV775370 similar to UniRef100_A7Q5Y6 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 428
Score = 373 bits (188), Expect = e-102
Identities = 259/280 (92%), Gaps = 2/280 (0%)
Strand = Plus / Minus
Query: 512 tttgctggaaattcactgcttcaaagcttcaatccctctttgaggaatctgggtgtgttg 571
|||||||||| ||||||||||| |||||||||||||||||||||| || |||||||||||
Sbjct: 428 tttgctggaa-ttcactgcttccaagcttcaatccctctttgaggtatatgggtgtgttg 370
Query: 572 ccaagctcagaactgttggtgagaaggaggaaccctttgtcactgacaa-tgggaactat 630
|| ||||||||||||||||||||||||||||||||||| || ||||| | ||||||||||
Sbjct: 369 cccagctcagaactgttggtgagaaggaggaaccctttctccctgaccactgggaactat 310
Query: 631 attgtggatttgtatttcaaggagagtattggtgatttgaaggctgccagtgattcaatt 690
||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct: 309 attttggatttgtatttcaaggagaatattggtgatttgaaggctgcccgtgattccatt 250
Query: 691 ctgcagattgctggtgttgttgagcatggaatgtttctggatatggctaccactgttatt 750
||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 249 ttgccgattgctggtgttgttgagcctggaatgtttctggatatggctacccctgttatt 190
Query: 751 attgcaggtgaacttgggctaacggtgaaaaacaaatagc 790
||||| |||||||||||||| ||||||| |||| ||||||
Sbjct: 189 attgccggtgaacttgggctgacggtgacaaaccaatagc 150
>gnl|LJGI|TC74654 similar to UniRef100_A7P3I3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 549
Score = 341 bits (172), Expect = 4e-93
Identities = 178/180 (98%)
Strand = Plus / Plus
Query: 611 tcactgacaatgggaactatattgtggatttgtatttcaaggagagtattggtgatttga 670
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcactgaccatgggaactatattgtggatttgtatttcaaggagagtattggtgatttga 60
Query: 671 aggctgccagtgattcaattctgcagattgctggtgttgttgagcatggaatgtttctgg 730
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggctgccagtgactcaattctgcagattgctggtgttgttgagcatggaatgtttctgg 120
Query: 731 atatggctaccactgttattattgcaggtgaacttgggctaacggtgaaaaacaaatagc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatggctaccactgttattattgcaggtgaacttgggctaacggtgaaaaacaaatagc 180
>gnl|LJGI|TC61450 similar to UniRef100_A7Q5Y6 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1261
Score = 103 bits (52), Expect = 2e-21
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 82 ctcacccaagacgatttgaagaaaatcgccgcctacaaagccgtcgagtatgtcgaatcc 141
|||||||||||||| | |||| | |||||||| |||| |||||||| || ||| | |||
Sbjct: 346 ctcacccaagacgacctcaagagactcgccgccgacaaggccgtcgactacgtcaagtcc 405
Query: 142 ggcatggtcctcggcctcggcaccggctccaccgcc 177
||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggcatggtcctcggcctcggcaccggctccaccgcc 441
Score = 93.7 bits (47), Expect = 2e-18
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 322 gatctcgccattgacggcgccgacgaggttgatccttatctcaacctcgtcaaggggcgc 381
||||||||||| ||||||||||||||||| || |||| ||||||||||||||||| |||
Sbjct: 586 gatctcgccatcgacggcgccgacgaggtcgaccctttcctcaacctcgtcaagggtcgc 645
Query: 382 ggtgggtcgcttctcagggagaagatggtggaggc 416
|| || | |||||| ||||||||||||| |||||
Sbjct: 646 ggcggcgctcttctccgggagaagatggtcgaggc 680
>gnl|LJGI|TC78462 similar to UniRef100_A7Q5Y6 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 486
Score = 52.0 bits (26), Expect = 5e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 322 gatctcgccattgacggcgccgacgaggttgatccttatctcaacctcgtcaaggggcgc 381
||||||||||||||||| ||||||| ||| ||| || | |||| |||||||||||| |||
Sbjct: 310 gatctcgccattgacggtgccgacggggtcgat-ctcacctcatcctcgtcaagggtcgc 368
Query: 382 gg 383
||
Sbjct: 369 gg 370
>gnl|LJGI|TC72661 similar to UniRef100_A7NZE2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1114
Score = 52.0 bits (26), Expect = 5e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 322 gatctcgccattgacggcgccgacgaggttgatccttatctcaacctcgtcaaggggcgc 381
||||||||||||||||| ||||||| ||| ||| || | |||| |||||||||||| |||
Sbjct: 236 gatctcgccattgacggtgccgacggggtcgat-ctcacctcatcctcgtcaagggtcgc 294
Query: 382 gg 383
||
Sbjct: 295 gg 296