Miyakogusa Predicted Gene
- Lj5g3v2166040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2166040.1 tr|G7KNC3|G7KNC3_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_6g060650 PE=4 SV=1,43.61,2e-19,
,CUFF.56773.1
(415 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58640 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 94 8e-19
gnl|LJGI|TC74519 68 5e-11
gnl|LJGI|TC81656 64 7e-10
gnl|LJGI|TC70514 weakly similar to UniRef100_A7Q430 Cluster: Chr... 54 7e-07
>gnl|LJGI|TC58640 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1577
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 125 atacaattgagatttgggttatggaaaaatacaaaatacaatcttcttggaccaagtcta 184
|||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| | |
Sbjct: 1153 atacaattgaaatatgggttatggaaaaatacaaagtacactcttcttggaccaagacca 1212
Query: 185 ttgttctatctttga 199
||||||| |||||||
Sbjct: 1213 ttgttctctctttga 1227
>gnl|LJGI|TC74519
Length = 592
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 124 gatacaattgagatttgggttatggaaaaatacaaaatacaatcttcttggaccaagtct 183
||||||||||| || ||||||||| | ||||||||| ||||||| |||||||||||| ||
Sbjct: 211 gatacaattgaaatatgggttatgaagaaatacaaagtacaatcatcttggaccaagact 270
Query: 184 attgtt 189
|||||
Sbjct: 271 cttgtt 276
>gnl|LJGI|TC81656
Length = 1322
Score = 63.9 bits (32), Expect = 7e-10
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 280 aaactggtgaggtttagtgatgaaggagaacagctagagcattgtgtgtatcctggttat 339
|||||||||| || || |||| | |||||||| ||||||||||| | |||| |||||||
Sbjct: 1074 aaactggtgaagtatactgataatggagaacaactagagcattgcgaatatcgtggttat 1133
Query: 340 ctagaatccatagtgcccatgtatacagagtc 371
||||||||| |||||||| |||| ||||||
Sbjct: 1134 ctagaatcccgggtgcccatctatatagagtc 1165
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 142 gttatggaaaaatacaaaatacaatcttcttggaccaagtctattgttctatctttgaat 201
|||||||| || |||||| ||| ||||||||||||||| | |||||||||||||||| |
Sbjct: 957 gttatggataattacaaagcacagtcttcttggaccaagaccattgttctatctttgagt 1016
Query: 202 ggc 204
|||
Sbjct: 1017 ggc 1019
>gnl|LJGI|TC70514 weakly similar to UniRef100_A7Q430 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 842
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 139 tgggttatggaaaaatacaaaatacaatcttcttggaccaagtctattgttctatcttt 197
||||||||| | ||||||||| |||| | |||||||||||| || |||||||||||||
Sbjct: 25 tgggttatgaagaaatacaaagtacagacatcttggaccaagactgttgttctatcttt 83