Miyakogusa Predicted Gene
- Lj5g3v2152700.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2152700.3 Non Chatacterized Hit- tr|I3SCE2|I3SCE2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,42.2,5e-17,no
description,Nucleic acid-binding, OB-fold; DUF223,Domain of unknown
function DUF223; Nucleic acid,CUFF.57178.3
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76568 632 0.0
gnl|LJGI|TC74725 UniRef100_A9HYM4 Cluster: Thioesterase superfam... 452 e-126
gnl|LJGI|TC77857 355 3e-97
gnl|LJGI|TC81654 192 3e-48
gnl|LJGI|TC78642 74 2e-12
gnl|LJGI|TC82220 68 1e-10
gnl|LJGI|TC81813 62 6e-09
gnl|LJGI|BP067392 60 2e-08
gnl|LJGI|FS342767 UniRef100_Q93FJ5 Cluster: EspB; n=1; Citrobact... 58 1e-07
gnl|LJGI|BW596307 similar to UniRef100_A7P237 Cluster: Chromosom... 56 4e-07
gnl|LJGI|BP065104 52 6e-06
>gnl|LJGI|TC76568
Length = 532
Score = 632 bits (319), Expect = 0.0
Identities = 322/323 (99%)
Strand = Plus / Plus
Query: 38 cattgaatccccttcgttccatatgcattgggatcgatcctaaaaaagatacttggagag 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cattgaatccccttcgttccatatgcattgggatcgatcctaaaaaagatacttggagag 129
Query: 98 tgaaggttcgggttcttcgtgtttgggatatgtttccagttggtgaaccctcaaaacctt 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgaaggttcgggttcttcgtgtttgggatatgtttccagttggtgaaccctcaaaacctt 189
Query: 158 acgctatccatgttgtgcttattgatgtagagggtgtgaaaattgagggcatcattaaga 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 acgctatccatgttgtgcttattgatgtagagggtgtgaaaattgagggcatcattaaga 249
Query: 218 aagggatgctaaaaaagtttagaggtgaactggttgagggcagtgtatacaggataactt 277
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 250 aagggatgctaaaaaagtttagaggtgaactggttgagggcagtgtataaaggataactt 309
Query: 278 attttaatgttatttcaaactccggtgcatttcgtgccactgagcatgggttcaagatag 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 attttaatgttatttcaaactccggtgcatttcgtgccactgagcatgggttcaagatag 369
Query: 338 tatttaatagccagacaaaggtt 360
|||||||||||||||||||||||
Sbjct: 370 tatttaatagccagacaaaggtt 392
>gnl|LJGI|TC74725 UniRef100_A9HYM4 Cluster: Thioesterase superfamily protein; n=1;
Elusimicrobium minutum Pei191|Rep: Thioesterase
superfamily protein - Elusimicrobium minutum Pei191,
partial (6%)
Length = 835
Score = 452 bits (228), Expect = e-126
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 654 ctacgatacgggatacatagaaagatgcaggggaatcttttcacacttatcagatttcat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ctacgatacgggatacatagaaagatgcaggggaatcttttcacacttatcagatttcat 69
Query: 714 tggggtggtatcatctgtatcagctgtttggcgttttgtcacggaaggaaagacaaccaa 773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 70 tggggtggtatcatctgtatcagctgttaggcgttttgtcacggaaggaaagacaaccaa 129
Query: 774 aatgatgattgtggaacttggagattatgtgtactttcatactctgatctttatttctat 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aatgatgattgtggaacttggagattatgtgtactttcatactctgatctttatttctat 189
Query: 834 ttgctggagttttagttttctgaattttgttttgttgttctacattgtttaa 885
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttgctggagttttagttttctgaattttgttttgttgttctacattgtttaa 241
>gnl|LJGI|TC77857
Length = 1198
Score = 355 bits (179), Expect = 3e-97
Identities = 182/183 (99%)
Strand = Plus / Plus
Query: 38 cattgaatccccttcgttccatatgcattgggatcgatcctaaaaaagatacttggagag 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cattgaatccccttcgttccatatgcattgggatcgatcctaaaaaagatacttggagag 109
Query: 98 tgaaggttcgggttcttcgtgtttgggatatgtttccagttggtgaaccctcaaaacctt 157
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 110 tgaaggttcgggttcttcgtgtttgggatatgtttccagttggtgaaccgtcaaaacctt 169
Query: 158 acgctatccatgttgtgcttattgatgtagagggtgtgaaaattgagggcatcattaaga 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acgctatccatgttgtgcttattgatgtagagggtgtgaaaattgagggcatcattaaga 229
Query: 218 aag 220
|||
Sbjct: 230 aag 232
>gnl|LJGI|TC81654
Length = 486
Score = 192 bits (97), Expect = 3e-48
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 356 aggttcgcattatttcaatgtggaacactcgtgctcgatatcttccaactgttcaatcct 415
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 378 aggttcgcattatttcaatgtggaacactcctgctcgatatcttccaactgttcaatctt 437
Query: 416 gcacagaagtgattttgctggacaaggagggttctaagattcaagcttc 464
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 gcacagaagtgattttgttggacaaggagggttctaagattcaagcttc 486
>gnl|LJGI|TC78642
Length = 523
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 atggcagagagatggagcggcttggtgaggcttatgc 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 419 atggcagagagatggagcggcttggtgaggcttatgc 455
>gnl|LJGI|TC82220
Length = 1197
Score = 67.9 bits (34), Expect = 1e-10
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 82 aaagatacttggagagtgaaggttcgggttcttcgtgtttgggatatgtttccagttggt 141
||||| || |||| ||| |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 605 aaagaaacctggaaagttaaggttcgcgttcttcgtgtgtgggagatgtttcctattggt 546
Query: 142 gaaccctcaaaaccttacgctatccatgttgtgcttattgatgtagagggtgtgaaaatt 201
|| || || |||||||| || || || |||| || ||||||| |||||| || ||||||
Sbjct: 545 gatccatccaaaccttatgccattaatcttgtcctaattgatgaagagggagttaaaatt 486
Query: 202 ga 203
||
Sbjct: 485 ga 484
>gnl|LJGI|TC81813
Length = 572
Score = 61.9 bits (31), Expect = 6e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 141 tgaaccctcaaaaccttacgctatccatgttgtgcttattgatgtagagggtgtgaaaat 200
||||||||||||||| || ||| | ||| ||||||||||||||| |||||| ||| ||||
Sbjct: 47 tgaaccctcaaaaccatatgctctgcatcttgtgcttattgatggagagggcgtggaaat 106
Query: 201 tga 203
|||
Sbjct: 107 tga 109
>gnl|LJGI|BP067392
Length = 519
Score = 60.0 bits (30), Expect = 2e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 38 cattgaatccccttcgttccatatgcattgggatcgatcctaaaaaagatacttggagag 97
||||||||||||| || ||||||||||| |||| |||||| || ||||||||||||||
Sbjct: 457 cattgaatcccctgcgctccatatgcatngggagagatcctgcaagagatacttggagag 516
Query: 98 t 98
|
Sbjct: 517 t 517
>gnl|LJGI|FS342767 UniRef100_Q93FJ5 Cluster: EspB; n=1; Citrobacter rodentium|Rep:
EspB - Citrobacter rodentium, partial (5%)
Length = 750
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 atggcagagagatggagcggcttggtgaggcttatgc 37
|||| ||||||||||||| ||||||||||||||||||
Sbjct: 478 atggtagagagatggagcagcttggtgaggcttatgc 514
>gnl|LJGI|BW596307 similar to UniRef100_A7P237 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 468
Score = 56.0 bits (28), Expect = 4e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 100 aaggttcgggttcttcgtgtttgggatatgtttccagttggtga 143
|||||||||||||| ||| | ||||| |||||||||||||||||
Sbjct: 360 aaggttcgggttctgcgtttgtgggagatgtttccagttggtga 403
>gnl|LJGI|BP065104
Length = 501
Score = 52.0 bits (26), Expect = 6e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 100 aaggttcgggttcttcgtgtttgggatatgtttccagttggt 141
|||||||| ||||||||| | ||||| |||||||||||||||
Sbjct: 388 aaggttcgcgttcttcgtttgtgggagatgtttccagttggt 429