Miyakogusa Predicted Gene

Lj5g3v2152700.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2152700.2 tr|G7K1P7|G7K1P7_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_5g078250 PE=4
SV=1,30.72,0.000000000000003,no description,Nucleic acid-binding,
OB-fold; DUF223,Domain of unknown function DUF223; seg,NULL;
Nu,CUFF.57178.2
         (633 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74725 UniRef100_A9HYM4 Cluster: Thioesterase superfam...   452   e-126
gnl|LJGI|TC81654                                                      192   2e-48

>gnl|LJGI|TC74725 UniRef100_A9HYM4 Cluster: Thioesterase superfamily protein; n=1;
           Elusimicrobium minutum Pei191|Rep: Thioesterase
           superfamily protein - Elusimicrobium minutum Pei191,
           partial (6%)
          Length = 835

 Score =  452 bits (228), Expect = e-126
 Identities = 231/232 (99%)
 Strand = Plus / Plus

                                                                       
Query: 402 ctacgatacgggatacatagaaagatgcaggggaatcttttcacacttatcagatttcat 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  ctacgatacgggatacatagaaagatgcaggggaatcttttcacacttatcagatttcat 69

                                                                       
Query: 462 tggggtggtatcatctgtatcagctgtttggcgttttgtcacggaaggaaagacaaccaa 521
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 70  tggggtggtatcatctgtatcagctgttaggcgttttgtcacggaaggaaagacaaccaa 129

                                                                       
Query: 522 aatgatgattgtggaacttggagattatgtgtactttcatactctgatctttatttctat 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aatgatgattgtggaacttggagattatgtgtactttcatactctgatctttatttctat 189

                                                               
Query: 582 ttgctggagttttagttttctgaattttgttttgttgttctacattgtttaa 633
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttgctggagttttagttttctgaattttgttttgttgttctacattgtttaa 241


>gnl|LJGI|TC81654 
          Length = 486

 Score =  192 bits (97), Expect = 2e-48
 Identities = 106/109 (97%)
 Strand = Plus / Plus

                                                                       
Query: 104 aggttcgcattatttcaatgtggaacactcgtgctcgatatcttccaactgttcaatcct 163
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 378 aggttcgcattatttcaatgtggaacactcctgctcgatatcttccaactgttcaatctt 437

                                                            
Query: 164 gcacagaagtgattttgctggacaaggagggttctaagattcaagcttc 212
           ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 gcacagaagtgattttgttggacaaggagggttctaagattcaagcttc 486