Miyakogusa Predicted Gene
- Lj5g3v2133810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2133810.1 Non Chatacterized Hit- tr|A2Y0G6|A2Y0G6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,56.58,2e-18,seg,NULL; HMA_2,Heavy metal-associated domain, HMA;
HMA,Heavy metal-associated domain, HMA; SUBFAMIL,CUFF.56754.1
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79620 similar to UniRef100_A7P3I9 Cluster: Chromosome... 686 0.0
gnl|LJGI|TC62294 similar to UniRef100_A7NWF9 Cluster: Chromosome... 94 2e-18
>gnl|LJGI|TC79620 similar to UniRef100_A7P3I9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 747
Score = 686 bits (346), Expect = 0.0
Identities = 402/410 (98%), Gaps = 8/410 (1%)
Strand = Plus / Plus
Query: 1 atgactaaagaagaagactttaagctccttaaaatccagacttgtgttctcaaagtgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atgactaaagaagaagactttaagctccttaaaatccagacttgtgttctcaaagtgaac 214
Query: 61 attcactgtgatggttgtaagcagaaagtg-aag-aaactccttcagagaattgaaggtg 118
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 215 attcactgtgatggttgtaagcagaaagtgcaagcaaactccttcagagaattgaaggtg 274
Query: 119 ttt-accaagttcaaatag-atgcag-aacagc-agaaagtaacagtttcaggtagtgtg 174
||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||
Sbjct: 275 tttcaccaagttcaaatagcatgcagcaacagccagaaagtaacagtttcaggtagtgtg 334
Query: 175 gactctgcaactttgatcaagaaattga-acag-atctggtaaacatgctgagctctggt 232
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 335 gactctgcaactttgatcaagaaattgacacagcatctggtaaacatgctgagctctggt 394
Query: 233 ctcagaaggctaatcagaaccaaaagcagaagaacaacaacaatatcaacaatgtgaaag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctcagaaggctaatcagaaccaaaagcagaagaacaacaacaatatcaacaatgtgaaag 454
Query: 293 atgacaagaacaataaagggcaaaaacaaggactagtgaagggtcttgaggcagcattca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgacaagaacaataaagggcaaaaacaaggactagtgaagggtcttgaggcagcattca 514
Query: 353 aaaaccaccagcagcagcagcagaagtttcctgctttcagttctgaagag 402
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaaaccaccagcagcagcagcagaagtttcctgctttcagttctgaagag 564
Score = 216 bits (109), Expect = 2e-55
Identities = 123/125 (98%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 447 agagttgaggttcatcagggagaaagcaaatcagcttcaattgctgaggcagcagcagca 506
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 609 agagttgaggttcatcagggagaaagcaaatcagcttcaattgctga-gcagcagcagca 667
Query: 507 agcagttgttgatgctaacaacaatgtgaagaaggcaatttctgcagcttccaacaatgg 566
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 668 agcagttgttgatgctaacaacaatgtgaagaa-gcaatttctgcagcttccaacaatgg 726
Query: 567 tcata 571
|||||
Sbjct: 727 tcata 731
>gnl|LJGI|TC62294 similar to UniRef100_A7NWF9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 726
Score = 93.7 bits (47), Expect = 2e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 43 tgtgttctcaaagtgaacattcactgtgatggttgtaagcagaaagtgaagaaactcctt 102
|||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 406 tgtgttcttaaagtgaacatacactgtgatgggtgtaagcagaaagtgaagaaaatcctg 465
Query: 103 cagagaattga 113
|||| ||||||
Sbjct: 466 cagaaaattga 476