Miyakogusa Predicted Gene

Lj5g3v2123620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2123620.1 Non Chatacterized Hit- tr|B9S6V9|B9S6V9_RICCO
Amino acid transporter, putative OS=Ricinus communis G,59.21,1e-18,
,CUFF.56736.1
         (264 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57813 similar to UniRef100_A7PKV9 Cluster: Chromosome...   206   5e-53

>gnl|LJGI|TC57813 similar to UniRef100_A7PKV9 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 848

 Score =  206 bits (104), Expect = 5e-53
 Identities = 197/228 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcgtgctctcccaggcgggattctgcgtcaacttcctcattttcctcgccacctcc 60
           ||||| || ||||||||||| ||||||||||||| || |||||| ||| |||| ||| | 
Sbjct: 471 atgattgtcctctcccaggctggattctgcgtcagctacctcatcttcatcgcgaccact 530

                                                                       
Query: 61  ctcggattcctcacaaacaacgccgccggtgacactgtcccggtttttctgggtttgact 120
           ||||| |||||||| | |||||||||||| ||||| || |||||||| ||||| || |||
Sbjct: 531 ctcggcttcctcaccagcaacgccgccggcgacaccgtgccggttttcctgggcttaact 590

                                                                       
Query: 121 ctgaaggtcttgtttctatggggttgtctcccttttcagctaggtttgaattctatgccc 180
           | |||||| |||||||||||||||||| |||||||||||||||| |||||||| || || 
Sbjct: 591 ccgaaggtgttgtttctatggggttgtttcccttttcagctagggttgaattcaatccct 650

                                                           
Query: 181 accttgacccatttggttcctttaagtatgtttgctgatgttgttgat 228
           || ||||||||||||| |||||| ||||| |||||||||| |||||||
Sbjct: 651 actttgacccatttggctcctttgagtatttttgctgatgctgttgat 698