Miyakogusa Predicted Gene
- Lj5g3v2112090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2112090.1 Non Chatacterized Hit- tr|I3SBZ4|I3SBZ4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,40.41,5e-19,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; ZFP1 (ARABIDOP,CUFF.56694.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66050 similar to UniRef100_A7QW61 Cluster: Chromosome... 1162 0.0
gnl|LJGI|TC66456 similar to UniRef100_A7Q919 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC66050 similar to UniRef100_A7QW61 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 976
Score = 1162 bits (586), Expect = 0.0
Identities = 592/594 (99%)
Strand = Plus / Plus
Query: 1 atgatgatcaaggaaaatgaaacaattgttacaacaaacaaggaacaagctagtgaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 atgatgatcaaggaaaatgaaacaattgttacaacaaacaaggaacaagctagtgaaggg 116
Query: 61 atgagcacagatagcaacaatgatggaagagaagatgataatccagaagagtggttgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgagcacagatagcaacaatgatggaagagaagatgataatccagaagagtggttgaac 176
Query: 121 ctgagcttaggaggaggaagttcactctcaacagaaggagatgctgaatcacaatcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ctgagcttaggaggaggaagttcactctcaacagaaggagatgctgaatcacaatcaaga 236
Query: 181 ccaccaccaccacctactgccaaagttttttcatgcaacttctgcaggaggaagttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ccaccaccaccacctactgccaaagttttttcatgcaacttctgcaggaggaagttcttc 296
Query: 241 agttcacaagcattaggaggtcatcagaatgctcacaaaagggaaagaggtgctgccagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agttcacaagcattaggaggtcatcagaatgctcacaaaagggaaagaggtgctgccagg 356
Query: 301 agatatcaatctcagaggacgatggcgctaatgggcttgcccatgaacactcccatgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agatatcaatctcagaggacgatggcgctaatgggcttgcccatgaacactcccatgctt 416
Query: 361 cgaacacttggtgtccagccccattcactcgtgcacaagccatgcagaggtggaactgtg 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 417 cgaacacttggtgtccagccccattcactcgtgcacaagccatgcggaggtggaactgtg 476
Query: 421 gtggcaccaagctttcatgaagcatatgcagcagcagggattggaatgccgtgtacacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtggcaccaagctttcatgaagcatatgcagcagcagggattggaatgccgtgtacacct 536
Query: 481 ttcgcggccgaggatcaaacggatctggtgtggccagggagctttcgtatggttctacaa 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 537 ttcgcggccgaggatcaaacggatctggtgtggccagggggctttcgtatggttctacaa 596
Query: 541 cagcccgagccaccacaggagccactcaagcttgatttagacctcagactctga 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cagcccgagccaccacaggagccactcaagcttgatttagacctcagactctga 650
>gnl|LJGI|TC66456 similar to UniRef100_A7Q919 Cluster: Chromosome chr9 scaffold_65,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_65, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1170
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 222 ctgcaggaggaagttcttcagttcacaagcattaggaggtcatcagaatgctcacaaaag 281
||||||| | || |||||||| |||||||| | || ||||| |||||||||||||||||
Sbjct: 417 ctgcaggcgaaaattcttcagctcacaagcgctggggggtcaccagaatgctcacaaaag 476
Query: 282 gga 284
|||
Sbjct: 477 gga 479