Miyakogusa Predicted Gene

Lj5g3v2112080.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2112080.1 tr|K1QTB5|K1QTB5_CRAGI TIP41-like protein
OS=Crassostrea gigas PE=4 SV=1,38.14,0.0000000003,TIP41,TIP41-like
protein; PUTATIVE CYTOSKELETAL PROTEIN,NULL; GAF/PUTATIVE CYTOSKELETAL
PROTEIN,NULL,CUFF.56699.1
         (876 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61371 similar to UniRef100_A7QW62 Cluster: Chromosome...  1628   0.0  

>gnl|LJGI|TC61371 similar to UniRef100_A7QW62 Cluster: Chromosome chr3 scaffold_199,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_199, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 838

 Score = 1628 bits (821), Expect = 0.0
 Identities = 824/825 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaatttgcagtcgacgagaacgacctgaaagccgccggcgccgagctcttcgaggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  atggaatttgcagtcgacgagaacgacctgaaagccgccggcgccgagctcttcgaggac 73

                                                                       
Query: 61  ggtggccggaaaggcgtccgcatccatggctggctgattgagtctcggaggcactccata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  ggtggccggaaaggcgtccgcatccatggctggctgattgagtctcggaggcactccata 133

                                                                       
Query: 121 ctcacctcatcaaacgtcgaagagtgggaacagaagcttcacacgtctcatttaccagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctcacctcatcaaacgtcgaagagtgggaacagaagcttcacacgtctcatttaccagaa 193

                                                                       
Query: 181 atggtttttggagaaaacactttgattctaaagcatttgagtagtggcaccaaaattcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atggtttttggagaaaacactttgattctaaagcatttgagtagtggcaccaaaattcac 253

                                                                       
Query: 241 ttcaatgcatttgatgctcttcgtggctggaaacaggaagctttgccaccggttgaagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttcaatgcatttgatgctcttcgtggctggaaacaggaagctttgccaccggttgaagtt 313

                                                                       
Query: 301 cctgcagcagctcaatggaagtttagatgcaagccttctgaacaagtgatactagactac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctgcagcagctcaatggaagtttagatgcaagccttctgaacaagtgatactagactac 373

                                                                       
Query: 361 gactatacatttacaacaccttattgtggaagtggcactattgagattgataaagatctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gactatacatttacaacaccttattgtggaagtggcactattgagattgataaagatctg 433

                                                                       
Query: 421 aatgcgagcgagatttctgaggaaactagcaatcttcattgggaagactgcaaggaacaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aatgcgagcgagatttctgaggaaactagcaatcttcattgggaagactgcaaggaacaa 493

                                                                       
Query: 481 attgacttggtttcattggcgtcgaaagagcctatacttttctatgatgaggtggtacta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 attgacttggtttcattggcgtcgaaagagcctatacttttctatgatgaggtggtacta 553

                                                                       
Query: 541 tatgaggatgaacttgctgataatggagtatcacttcttaccgtaaaagtgagagtcatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tatgaggatgaacttgctgataatggagtatcacttcttaccgtaaaagtgagagtcatg 613

                                                                       
Query: 601 ccaagttcttggtttcttctcttgcgattctggcttagagtagacggagtgttgattcga 660
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 614 ccaagttcttggtttcttctcttgcgattctggcttagagtagacagagtgttgattcga 673

                                                                       
Query: 661 ctgagagatacacgtatgcactgtgtatttggtggaagcacaaatcccgttattcttaga 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctgagagatacacgtatgcactgtgtatttggtggaagcacaaatcccgttattcttaga 733

                                                                       
Query: 721 gagagttgctggagagaatctacatttcaagctttgtctgcgaaagggaccccttttgat 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gagagttgctggagagaatctacatttcaagctttgtctgcgaaagggaccccttttgat 793

                                                        
Query: 781 cctgctgtgtataatgatccaagcattatcagccagaggctcccc 825
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cctgctgtgtataatgatccaagcattatcagccagaggctcccc 838