Miyakogusa Predicted Gene
- Lj5g3v2112040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2112040.1 Non Chatacterized Hit- tr|B7FMC0|B7FMC0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.26,0,Thioredoxin,Thioredoxin domain; coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; ,CUFF.56695.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66392 similar to UniRef100_A7QW72 Cluster: Chromosome... 1279 0.0
gnl|LJGI|AV778604 similar to UniRef100_A7QW72 Cluster: Chromosom... 131 6e-30
>gnl|LJGI|TC66392 similar to UniRef100_A7QW72 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 966
Score = 1279 bits (645), Expect = 0.0
Identities = 645/645 (100%)
Strand = Plus / Plus
Query: 1 atggataagggaaagatccaagaggtgatcgagaagcaagtcctcacggtggttcaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atggataagggaaagatccaagaggtgatcgagaagcaagtcctcacggtggttcaagcc 104
Query: 61 gtcgaggacaagatcgacgatgagatctccgccctcgaccgcctcgactccgacgatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gtcgaggacaagatcgacgatgagatctccgccctcgaccgcctcgactccgacgatctc 164
Query: 121 gaatccctccgtgagcgccgccttcaccagatgaaaaagatggccgagaagcgtaaccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gaatccctccgtgagcgccgccttcaccagatgaaaaagatggccgagaagcgtaaccgt 224
Query: 181 tggatctccctcggacacggcgattactccgagcttccctccgagaaagacttcttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tggatctccctcggacacggcgattactccgagcttccctccgagaaagacttcttctcc 284
Query: 241 gttgtcaaggccagtgatcgcgtcgtctgccatttcttccgcgaaaattggccctgcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttgtcaaggccagtgatcgcgtcgtctgccatttcttccgcgaaaattggccctgcaag 344
Query: 301 gttgcagacaagcatttaggcgtgttggcaaagcagcatatcgaaactcgttttgtgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttgcagacaagcatttaggcgtgttggcaaagcagcatatcgaaactcgttttgtgaag 404
Query: 361 attaatgctgaaaaaagtccgtttttggctgagaagctcaagatcactgttcttccaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 attaatgctgaaaaaagtccgtttttggctgagaagctcaagatcactgttcttccaact 464
Query: 421 cttgccctcataaagaatgccaaagtggatgattatgtggtgggatttgatgaacttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cttgccctcataaagaatgccaaagtggatgattatgtggtgggatttgatgaacttggt 524
Query: 481 ggaactgatgattttagcaccgaggatttggaagaaagattagctaaagctcaagtcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggaactgatgattttagcaccgaggatttggaagaaagattagctaaagctcaagtcatc 584
Query: 541 tttttggagggtgaatcatcaattcatcaagcaaggtccactgcacaatccaaaagaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttttggagggtgaatcatcaattcatcaagcaaggtccactgcacaatccaaaagaagt 644
Query: 601 gttcggcaggccacaagggcagattcatcagattcagagtaactt 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gttcggcaggccacaagggcagattcatcagattcagagtaactt 689
>gnl|LJGI|AV778604 similar to UniRef100_A7QW72 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 545
Score = 131 bits (66), Expect = 6e-30
Identities = 75/78 (96%)
Strand = Plus / Minus
Query: 27 gatcgagaagcaagtcctcacggtggttcaagccgtcgaggacaagatcgacgatgagat 86
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 472 gatcgagaagcaagtcctcacgctggtgcaagccgtcgaggacaagatcgacgatgagat 413
Query: 87 ctccgccctcgaccgcct 104
| ||||||||||||||||
Sbjct: 412 ccccgccctcgaccgcct 395