Miyakogusa Predicted Gene

Lj5g3v2112040.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2112040.1 Non Chatacterized Hit- tr|B7FMC0|B7FMC0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.26,0,Thioredoxin,Thioredoxin domain; coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; ,CUFF.56695.1
         (645 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66392 similar to UniRef100_A7QW72 Cluster: Chromosome...  1279   0.0  
gnl|LJGI|AV778604 similar to UniRef100_A7QW72 Cluster: Chromosom...   131   6e-30

>gnl|LJGI|TC66392 similar to UniRef100_A7QW72 Cluster: Chromosome chr3 scaffold_199,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_199, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 966

 Score = 1279 bits (645), Expect = 0.0
 Identities = 645/645 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggataagggaaagatccaagaggtgatcgagaagcaagtcctcacggtggttcaagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  atggataagggaaagatccaagaggtgatcgagaagcaagtcctcacggtggttcaagcc 104

                                                                       
Query: 61  gtcgaggacaagatcgacgatgagatctccgccctcgaccgcctcgactccgacgatctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gtcgaggacaagatcgacgatgagatctccgccctcgaccgcctcgactccgacgatctc 164

                                                                       
Query: 121 gaatccctccgtgagcgccgccttcaccagatgaaaaagatggccgagaagcgtaaccgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gaatccctccgtgagcgccgccttcaccagatgaaaaagatggccgagaagcgtaaccgt 224

                                                                       
Query: 181 tggatctccctcggacacggcgattactccgagcttccctccgagaaagacttcttctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tggatctccctcggacacggcgattactccgagcttccctccgagaaagacttcttctcc 284

                                                                       
Query: 241 gttgtcaaggccagtgatcgcgtcgtctgccatttcttccgcgaaaattggccctgcaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttgtcaaggccagtgatcgcgtcgtctgccatttcttccgcgaaaattggccctgcaag 344

                                                                       
Query: 301 gttgcagacaagcatttaggcgtgttggcaaagcagcatatcgaaactcgttttgtgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttgcagacaagcatttaggcgtgttggcaaagcagcatatcgaaactcgttttgtgaag 404

                                                                       
Query: 361 attaatgctgaaaaaagtccgtttttggctgagaagctcaagatcactgttcttccaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 attaatgctgaaaaaagtccgtttttggctgagaagctcaagatcactgttcttccaact 464

                                                                       
Query: 421 cttgccctcataaagaatgccaaagtggatgattatgtggtgggatttgatgaacttggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cttgccctcataaagaatgccaaagtggatgattatgtggtgggatttgatgaacttggt 524

                                                                       
Query: 481 ggaactgatgattttagcaccgaggatttggaagaaagattagctaaagctcaagtcatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggaactgatgattttagcaccgaggatttggaagaaagattagctaaagctcaagtcatc 584

                                                                       
Query: 541 tttttggagggtgaatcatcaattcatcaagcaaggtccactgcacaatccaaaagaagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttttggagggtgaatcatcaattcatcaagcaaggtccactgcacaatccaaaagaagt 644

                                                        
Query: 601 gttcggcaggccacaagggcagattcatcagattcagagtaactt 645
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gttcggcaggccacaagggcagattcatcagattcagagtaactt 689


>gnl|LJGI|AV778604 similar to UniRef100_A7QW72 Cluster: Chromosome chr3 scaffold_199,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_199, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 545

 Score =  131 bits (66), Expect = 6e-30
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                       
Query: 27  gatcgagaagcaagtcctcacggtggttcaagccgtcgaggacaagatcgacgatgagat 86
           |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 472 gatcgagaagcaagtcctcacgctggtgcaagccgtcgaggacaagatcgacgatgagat 413

                             
Query: 87  ctccgccctcgaccgcct 104
           | ||||||||||||||||
Sbjct: 412 ccccgccctcgaccgcct 395