Miyakogusa Predicted Gene
- Lj5g3v2112000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2112000.1 Non Chatacterized Hit- tr|I1LEG8|I1LEG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5297
PE=,89.7,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL; DUF620,Protein of unkno,CUFF.56693.1
(1392 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71308 similar to UniRef100_A7QW76 Cluster: Chromosome... 803 0.0
gnl|LJGI|TC71685 similar to UniRef100_A7QW76 Cluster: Chromosome... 450 e-125
gnl|LJGI|TC82346 similar to UniRef100_A7NU60 Cluster: Chromosome... 176 2e-43
gnl|LJGI|AV422580 similar to UniRef100_A7QW76 Cluster: Chromosom... 167 2e-40
>gnl|LJGI|TC71308 similar to UniRef100_A7QW76 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 622
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atggaaaagaaacagggtttcttctccgctctcaaacacgaggtagttcgcggcctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atggaaaagaaacagggtttcttctccgctctcaaacacgaggtagttcgcggcctctca 277
Query: 61 ccttcccgttcccgttccaccagccccgcccgaaccgcctcacccatctccaccctcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ccttcccgttcccgttccaccagccccgcccgaaccgcctcacccatctccaccctcctc 337
Query: 121 cggaggaaaaaacacctcgccgcccccacccttgactcctccgtcgcgagatccggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cggaggaaaaaacacctcgccgcccccacccttgactcctccgtcgcgagatccggcagc 397
Query: 181 ctgaggccgctaggagagactctaacgcctctcatggagggacctgaccaggaaaacggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctgaggccgctaggagagactctaacgcctctcatggagggacctgaccaggaaaacggg 457
Query: 241 gaccccaaacgggtcgggtcgggtctcggaaactggatgaagggtcagctgtctcgtacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaccccaaacgggtcgggtcgggtctcggaaactggatgaagggtcagctgtctcgtacc 517
Query: 301 ccctccgtctcgtacaagaggtctgatctgaggcttctgcttggtgtcatgggtgcgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ccctccgtctcgtacaagaggtctgatctgaggcttctgcttggtgtcatgggtgcgccg 577
Query: 361 ctggctccgcttcatgtctgctccaccgaccctttgcctcatctc 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ctggctccgcttcatgtctgctccaccgaccctttgcctcatctc 622
>gnl|LJGI|TC71685 similar to UniRef100_A7QW76 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 809
Score = 450 bits (227), Expect = e-125
Identities = 234/235 (99%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 1158 cagaatggaagaagcttggacgattgaagaagtcgcgttcaacattcctggcctctctgt 1217
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 cagaatggaagaagcttggacgattgaagaagtcgcgtt-aacattcctggcctctctgt 59
Query: 1218 agattgcttcattcccccagctgatctgagtacaggttgtatcagtgaagcctgtgaact 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 agattgcttcattcccccagctgatctgagtacaggttgtatcagtgaagcctgtgaact 119
Query: 1278 ccctcagaatgaaaaagcaaagaactcactagcaggacaccggaccaaggttgttgccct 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccctcagaatgaaaaagcaaagaactcactagcaggacaccggaccaaggttgttgccct 179
Query: 1338 ggagaaacagcataattgcaacattgataacatgatgtggaacatggaaatctaa 1392
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggagaaacagcataattgcaacattgataacatgatgtggaacatggaaatctaa 234
>gnl|LJGI|TC82346 similar to UniRef100_A7NU60 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1187
Score = 176 bits (89), Expect = 2e-43
Identities = 179/209 (85%)
Strand = Plus / Plus
Query: 1009 aatggaggtgatgcggtttattgggaaaccacaatcaattcattccttgatgactacagg 1068
|||||||| |||||||| |||||||| ||||| || || ||||| |||||||||||||||
Sbjct: 24 aatggaggcgatgcggtgtattgggagaccaccataaactcatttcttgatgactacagg 83
Query: 1069 cctgtggaagggatcatgattgcccactcagggcattctgtggtaactctgttcaggttt 1128
||||| ||||||||||||||||| |||||||| | || ||||| || ||||||||||||
Sbjct: 84 cctgttgaagggatcatgattgctcactcaggtcgatccgtggtgacactgttcaggttt 143
Query: 1129 ggggagatggccatgagccacactaaaaccagaatggaagaagcttggacgattgaagaa 1188
||||| | || ||||||||||| |||||||| ||||||||||| ||||| ||||| ||
Sbjct: 144 ggggaaacagcaatgagccacacaaaaaccaggatggaagaagcatggacaattgaggag 203
Query: 1189 gtcgcgttcaacattcctggcctctctgt 1217
||||| ||||| | |||||||| |||||
Sbjct: 204 gtcgccttcaatgtccctggcctttctgt 232
>gnl|LJGI|AV422580 similar to UniRef100_A7QW76 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 477
Score = 167 bits (84), Expect = 2e-40
Identities = 165/192 (85%)
Strand = Plus / Plus
Query: 594 tgcagagtctggtggatttgtgctgtggcagatgaatcctgacatgtggtatgtagagct 653
||||||||| ||||| ||||| |||||||||||||| || |||||||||||||| |||||
Sbjct: 286 tgcagagtccggtgggtttgtcctgtggcagatgaacccagacatgtggtatgtggagct 345
Query: 654 tgcagttgggggcagcaaggttcatgctggctgcaatggaaagcttgtctggaggcacac 713
||| |||| ||||||||||||||||| || |||||||| ||||||| |||||||||||
Sbjct: 346 tgctcttggtggcagcaaggttcatgcgggttgcaatggggagcttgtgtggaggcacac 405
Query: 714 accttggctaggtgctcacacagcaaagggacctgtgaggcctttgcggcgtgcacttca 773
|| ||||| ||||| || ||||||| || || |||||||||||| | ||||| |||||
Sbjct: 406 gccatggctcggtgcacatgcagcaaaagggccagtgaggcctttgagacgtgcccttca 465
Query: 774 gggtcttgaccc 785
|||||||||||
Sbjct: 466 aggtcttgaccc 477
Score = 123 bits (62), Expect = 3e-27
Identities = 182/222 (81%)
Strand = Plus / Plus
Query: 338 tgcttggtgtcatgggtgcgccgctggctccgcttcatgtctgctccaccgaccctttgc 397
|||||||||| ||||||| || || ||||| ||||||||||| |||| |||||||| |
Sbjct: 30 tgcttggtgtgttgggtgctccacttgctcctgttcatgtctgcaccactgacccttttc 89
Query: 398 ctcatctcagcattaaggacacacccatcgaaacttcatctgcacagtatatattgcagc 457
||||||||||||| || |||| |||||| |||||||| ||||| ||||| ||| |||| |
Sbjct: 90 ctcatctcagcatcaaagacatacccattgaaacttcttctgctcagtacatactgcaac 149
Query: 458 agtacactgctgcatctggagggcagaagttgcagaactctataaaaaattcatatgcaa 517
|||||| |||||| ||||||||||| ||| | || || || || || ||| | ||||| |
Sbjct: 150 agtacattgctgcttctggagggcaaaagcttcaaaattccatcaacaatgcttatgcca 209
Query: 518 tgggaaaggttcgaatggtagcttctgagttcgaaactgcga 559
|||| ||||| | ||| |||| |||||||| || |||||||
Sbjct: 210 tggggaaggtgaggatgatagcctctgagtttgagactgcga 251