Miyakogusa Predicted Gene
- Lj5g3v2111990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2111990.1 Non Chatacterized Hit- tr|C5Y420|C5Y420_SORBI
Putative uncharacterized protein Sb05g002040
OS=Sorghu,27,2e-18,TPR-like,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide,CUFF.56684.1
(1668 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO035880 similar to UniRef100_A7QW79 Cluster: Chromosom... 1360 0.0
>gnl|LJGI|GO035880 similar to UniRef100_A7QW79 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 686
Score = 1360 bits (686), Expect = 0.0
Identities = 686/686 (100%)
Strand = Plus / Plus
Query: 436 agaacggcaggctgcaaacctaatatatgcaccttcaatgcccttatcaagatgtatgga 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaacggcaggctgcaaacctaatatatgcaccttcaatgcccttatcaagatgtatgga 60
Query: 496 gaccgagggatgtttgcggaaatggggaaagtttttaaggagatcaaggcatgccagtgt 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaccgagggatgtttgcggaaatggggaaagtttttaaggagatcaaggcatgccagtgt 120
Query: 556 tcccctgatattgttacttggaacacacttttggctgtatttggacaaaatggattggac 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccctgatattgttacttggaacacacttttggctgtatttggacaaaatggattggac 180
Query: 616 tctgaagtatcaggagtgttcaaagaaatgaagagagccgggtttgtgccggagagggag 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgaagtatcaggagtgttcaaagaaatgaagagagccgggtttgtgccggagagggag 240
Query: 676 acattcaacactctaataagcgcatacagcaggtgtggttcctttgaccaagctagggct 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acattcaacactctaataagcgcatacagcaggtgtggttcctttgaccaagctagggct 300
Query: 736 gtttataagagaatgctggaggctggagtgactccagatctttcaacttataatgctgtt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttataagagaatgctggaggctggagtgactccagatctttcaacttataatgctgtt 360
Query: 796 ttagcagcattggctcgaggagggctttgggaacaatctgagaaagtccttagtgaaatg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagcagcattggctcgaggagggctttgggaacaatctgagaaagtccttagtgaaatg 420
Query: 856 gagaatggtcgatgtaaacctaatgaggtaacatactcttctttgcttcatgcttatgcc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagaatggtcgatgtaaacctaatgaggtaacatactcttctttgcttcatgcttatgcc 480
Query: 916 aatggcaaagagtttgaaaagatgaatgctcttgcagaggagatatactctggaaaaatt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatggcaaagagtttgaaaagatgaatgctcttgcagaggagatatactctggaaaaatt 540
Query: 976 acaacacatgctgttcttttgaagacccttgttctagtaaatagcaagtttgatttccta 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaacacatgctgttcttttgaagacccttgttctagtaaatagcaagtttgatttccta 600
Query: 1036 gcagaagcagagcatgcatttttggagtttaagaagagaggaattccgcatgacataact 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcagaagcagagcatgcatttttggagtttaagaagagaggaattccgcatgacataact 660
Query: 1096 actttgaatgcgatgctttcacttta 1121
||||||||||||||||||||||||||
Sbjct: 661 actttgaatgcgatgctttcacttta 686