Miyakogusa Predicted Gene

Lj5g3v2111950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2111950.1 Non Chatacterized Hit- tr|A9NX97|A9NX97_PICSI
Putative uncharacterized protein OS=Picea sitchensis P,35.71,4e-17,no
description,Zinc finger, RING/FYVE/PHD-type; zf-RING_2,Zinc finger,
RING-type; Ring finger,Zinc f,CUFF.56685.1
         (765 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70287 similar to UniRef100_Q8LJR8 Cluster: RING-H2 fi...   720   0.0  
gnl|LJGI|FS348069 similar to UniRef100_Q8LJR8 Cluster: RING-H2 f...   561   e-159

>gnl|LJGI|TC70287 similar to UniRef100_Q8LJR8 Cluster: RING-H2 finger protein; n=1;
           Glycine max|Rep: RING-H2 finger protein - Glycine max
           (Soybean), partial (19%)
          Length = 766

 Score =  720 bits (363), Expect = 0.0
 Identities = 363/363 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgagcgcttctgagctattccacatcagacggaatcgattcggagcacgaactact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  atgacgagcgcttctgagctattccacatcagacggaatcgattcggagcacgaactact 96

                                                                       
Query: 61  gctctcgatctagccttcgattcctccccttcagctccacatcaccgctttcacgacccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  gctctcgatctagccttcgattcctccccttcagctccacatcaccgctttcacgacccc 156

                                                                       
Query: 121 gacgccgccgcagcagcagcttccctccgtctccgccgccgccgccaccacccggagcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gacgccgccgcagcagcagcttccctccgtctccgccgccgccgccaccacccggagcgt 216

                                                                       
Query: 181 tatgcaactgatagaattcatggggttgggaggcatcgccgctctgctagtgctatacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tatgcaactgatagaattcatggggttgggaggcatcgccgctctgctagtgctatacat 276

                                                                       
Query: 241 gatagaaccgttgattctgcagaaaatgtcatgagaggcactgatagattaccagatggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gatagaaccgttgattctgcagaaaatgtcatgagaggcactgatagattaccagatggt 336

                                                                       
Query: 301 gtgttacttgcacgggcaaggctcctgcaaaggttgagaggggagcctctctctagaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtgttacttgcacgggcaaggctcctgcaaaggttgagaggggagcctctctctagaacc 396

              
Query: 361 agg 363
           |||
Sbjct: 397 agg 399


>gnl|LJGI|FS348069 similar to UniRef100_Q8LJR8 Cluster: RING-H2 finger protein; n=1;
           Glycine max|Rep: RING-H2 finger protein - Glycine max
           (Soybean), partial (31%)
          Length = 693

 Score =  561 bits (283), Expect = e-159
 Identities = 283/283 (100%)
 Strand = Plus / Minus

                                                                       
Query: 483 agacctaaacaacaagccacctggactcactcaggaggatgtgaactgtttgcatctgga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agacctaaacaacaagccacctggactcactcaggaggatgtgaactgtttgcatctgga 634

                                                                       
Query: 543 agttttcaggatcagtgagacaggattagaatccagggtgcaggattgttccatatgctt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agttttcaggatcagtgagacaggattagaatccagggtgcaggattgttccatatgctt 574

                                                                       
Query: 603 ggagtctttcacggatggagatgagctgatacgcttgccatgtggacataaatttcactc 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggagtctttcacggatggagatgagctgatacgcttgccatgtggacataaatttcactc 514

                                                                       
Query: 663 tgcttgtctggatccttggattcgctgttgtggagactgtccatactgccggcgatgtat 722
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgcttgtctggatccttggattcgctgttgtggagactgtccatactgccggcgatgtat 454

                                                      
Query: 723 agttgtaaatagtcaccttgaagaaaatgaggctgagtagttt 765
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agttgtaaatagtcaccttgaagaaaatgaggctgagtagttt 411