Miyakogusa Predicted Gene
- Lj5g3v2110830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2110830.1 tr|Q93Z42|Q93Z42_ARATH AT5g19750/T29J13_170
OS=Arabidopsis thaliana GN=At5g19750 PE=2 SV=1,28.41,6e-19,SUBFAMILY
NOT NAMED,NULL; PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2
(MPV17),Mpv17/PMP22; Mpv17_PMP22,Mpv,CUFF.56670.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70963 similar to UniRef100_A7QL48 Cluster: Chromosome... 1148 0.0
gnl|LJGI|FS338143 weakly similar to UniRef100_A7QL48 Cluster: Ch... 733 0.0
>gnl|LJGI|TC70963 similar to UniRef100_A7QL48 Cluster: Chromosome chr3 scaffold_117,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_117, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 1159
Score = 1148 bits (579), Expect = 0.0
Identities = 582/583 (99%)
Strand = Plus / Plus
Query: 192 aaccaccgccgccgcctccgcctccaaggttggttttgtaggttggtatttgggaatgat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaccaccgccgccgcctccgcctccaaggttggttttgtaggttggtatttgggaatgat 388
Query: 252 caaagcccggcccattctcaccaaaagtgttacttctgcacttatttacactgctgctga 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaagcccggcccattctcaccaaaagtgttacttctgcacttatttacactgctgctga 448
Query: 312 tttatcctcccaggctattgtgcggcaatcttcagaaccttttgatttcgtaagaacttt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttatcctcccaggctattgtgcggcaatcttcagaaccttttgatttcgtaagaacttt 508
Query: 372 acgcatggcgggatatgggatgatcatcttaggaccaacactgcatttctggttcaattt 431
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 509 acgcatggcgggatatgggatgatcatcttaggaccaacactccatttctggttcaattt 568
Query: 432 catgtcaaagcttttcccaaggacggatcttttctctacattgatgaaaatggtcatggg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catgtcaaagcttttcccaaggacggatcttttctctacattgatgaaaatggtcatggg 628
Query: 492 tcagacactttatggacctgccatgactgttattttcttctcatttaatgcgcatttgca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tcagacactttatggacctgccatgactgttattttcttctcatttaatgcgcatttgca 688
Query: 552 gggtgaaactggcacggagattgtagcacgcttaaagcgggatttgcttcctacgttttt 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gggtgaaactggcacggagattgtagcacgcttaaagcgggatttgcttcctacgttttt 748
Query: 612 gagtggcgttatgtactggcctttgtgtgattttattactttcagattcattcctgtcca 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gagtggcgttatgtactggcctttgtgtgattttattactttcagattcattcctgtcca 808
Query: 672 tttacagccattagtcagcaattcattttcatatttgtggaccatttacatcacctatat 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tttacagccattagtcagcaattcattttcatatttgtggaccatttacatcacctatat 868
Query: 732 ggcaagcctagagaaagctgagatagcagagatagctagctga 774
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ggcaagcctagagaaagctgagatagcagagatagctagctga 911
Score = 305 bits (154), Expect = 2e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 atgggtagttcttttcttaagaatcccatcaagttttcccatgtcatgaaccgtgtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgggtagttcttttcttaagaatcccatcaagttttcccatgtcatgaaccgtgtcatt 197
Query: 61 gatccttacaaagtgcagtctaaaccttactttcgattaccgcatttcctgaggaagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gatccttacaaagtgcagtctaaaccttactttcgattaccgcatttcctgaggaagcct 257
Query: 121 agagaatatcaagtgtcatcaccgtctttgttca 154
||||||||||||||||||||||||||||||||||
Sbjct: 258 agagaatatcaagtgtcatcaccgtctttgttca 291
>gnl|LJGI|FS338143 weakly similar to UniRef100_A7QL48 Cluster: Chromosome chr3
scaffold_117, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_117, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (48%)
Length = 684
Score = 733 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Plus
Query: 192 aaccaccgccgccgcctccgcctccaaggttggttttgtaggttggtatttgggaatgat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaccaccgccgccgcctccgcctccaaggttggttttgtaggttggtatttgggaatgat 370
Query: 252 caaagcccggcccattctcaccaaaagtgttacttctgcacttatttacactgctgctga 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caaagcccggcccattctcaccaaaagtgttacttctgcacttatttacactgctgctga 430
Query: 312 tttatcctcccaggctattgtgcggcaatcttcagaaccttttgatttcgtaagaacttt 371
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 431 tttatcctcccaggctattgtgcggcaatcttcacaaccttttgatttcgtaagaacttt 490
Query: 372 acgcatggcgggatatgggatgatcatcttaggaccaacactgcatttctggttcaattt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 acgcatggcgggatatgggatgatcatcttaggaccaacactgcatttctggttcaattt 550
Query: 432 catgtcaaagcttttcccaaggacggatcttttctctacattgatgaaaatggtcatggg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 catgtcaaagcttttcccaaggacggatcttttctctacattgatgaaaatggtcatggg 610
Query: 492 tcagacactttatggacctgccatgactgttattttcttctcatttaatgcgcatttgca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tcagacactttatggacctgccatgactgttattttcttctcatttaatgcgcatttgca 670
Query: 552 gggtgaaactggca 565
||||||||||||||
Sbjct: 671 gggtgaaactggca 684
Score = 305 bits (154), Expect = 2e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 atgggtagttcttttcttaagaatcccatcaagttttcccatgtcatgaaccgtgtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgggtagttcttttcttaagaatcccatcaagttttcccatgtcatgaaccgtgtcatt 191
Query: 61 gatccttacaaagtgcagtctaaaccttactttcgattaccgcatttcctgaggaagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gatccttacaaagtgcagtctaaaccttactttcgattaccgcatttcctgaggaagcct 251
Query: 121 agagaatatcaagtgtcatcaccgtctttgttca 154
||||||||||||||||||||||||||||||||||
Sbjct: 252 agagaatatcaagtgtcatcaccgtctttgttca 285