Miyakogusa Predicted Gene

Lj5g3v2099590.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2099590.1 Non Chatacterized Hit- tr|C3YH24|C3YH24_BRAFL
Putative uncharacterized protein OS=Branchiostoma
flor,40.52,8e-19,SUBFAMILY NOT NAMED,NULL; ZINC FINGER PROTEIN-LIKE
1,NULL,CUFF.56651.1
         (1005 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68490 similar to UniRef100_A7QL61 Cluster: Chromosome...  1992   0.0  

>gnl|LJGI|TC68490 similar to UniRef100_A7QL61 Cluster: Chromosome chr3 scaffold_117,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_117, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (86%)
          Length = 1478

 Score = 1992 bits (1005), Expect = 0.0
 Identities = 1005/1005 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggtggtctgcaaatgtcgcaaggctactaagttatattgcttcgtgcacaaagttcct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176  atggtggtctgcaaatgtcgcaaggctactaagttatattgcttcgtgcacaaagttcct 235

                                                                        
Query: 61   gtctgcggagaatgtatctgtttcccggagcaccaaatctgcgtgattcggacgtattca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  gtctgcggagaatgtatctgtttcccggagcaccaaatctgcgtgattcggacgtattca 295

                                                                        
Query: 121  gaatgggttatagatggggagtatgattggccccctaaatgctgccaatgccaagctgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  gaatgggttatagatggggagtatgattggccccctaaatgctgccaatgccaagctgtt 355

                                                                        
Query: 181  ttggaggagggggatggatctcaaactactagactgggttgcttacatgttatccacaca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  ttggaggagggggatggatctcaaactactagactgggttgcttacatgttatccacaca 415

                                                                        
Query: 241  aattgcttggtctcacatatcaagagttttcctccacatacggctccggctggatatgcg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  aattgcttggtctcacatatcaagagttttcctccacatacggctccggctggatatgcg 475

                                                                        
Query: 301  tgtcctacatgttccacatcgatatggcctcccaaaagcgtgaaagattctggatctcgt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  tgtcctacatgttccacatcgatatggcctcccaaaagcgtgaaagattctggatctcgt 535

                                                                        
Query: 361  cttcattccaagttgaaggaagctatcatgcagactggtatggaaaagaatatctttgga 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  cttcattccaagttgaaggaagctatcatgcagactggtatggaaaagaatatctttgga 595

                                                                        
Query: 421  aatcatccagtttcattgtcagtgacagaatctcgtagtcctccacctgcttttgcttca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  aatcatccagtttcattgtcagtgacagaatctcgtagtcctccacctgcttttgcttca 655

                                                                        
Query: 481  gagccgttgattggtagggaaaatcatggaaactcagactcacctgcaactgggtcagaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  gagccgttgattggtagggaaaatcatggaaactcagactcacctgcaactgggtcagaa 715

                                                                        
Query: 541  cctcctaaactttcagtgacagatattgtggagatagaaggtgccaattcagcaggaaat 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  cctcctaaactttcagtgacagatattgtggagatagaaggtgccaattcagcaggaaat 775

                                                                        
Query: 601  ttcgtgaaaggctcaagtcctgttggtcctgccacaaggaagggcgcattcaatgttgag 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  ttcgtgaaaggctcaagtcctgttggtcctgccacaaggaagggcgcattcaatgttgag 835

                                                                        
Query: 661  cgacagaactctgaaatctcatactatgctgatgatgaagatgggaatcgtaaaaagtat 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  cgacagaactctgaaatctcatactatgctgatgatgaagatgggaatcgtaaaaagtat 895

                                                                        
Query: 721  acaaaaagaggtccgttctaccacaagtttcttagagcattgcttcctttctggtctagt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  acaaaaagaggtccgttctaccacaagtttcttagagcattgcttcctttctggtctagt 955

                                                                        
Query: 781  gctttacctactctaccagtgactgcacctccaaggaaagatgcatcaaatgcaaccgaa 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gctttacctactctaccagtgactgcacctccaaggaaagatgcatcaaatgcaaccgaa 1015

                                                                        
Query: 841  ggctcagaaggccgtacacgacatcaaagatcatcaaggatggaccccagaaagattctt 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 ggctcagaaggccgtacacgacatcaaagatcatcaaggatggaccccagaaagattctt 1075

                                                                        
Query: 901  ctcctgattgcaattatggcgtgcatggcgactatgggtatattgtattacagactagtg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ctcctgattgcaattatggcgtgcatggcgactatgggtatattgtattacagactagtg 1135

                                                         
Query: 961  caacggggtccaggggaagagcttcctaatgaagaacaaatttga 1005
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 caacggggtccaggggaagagcttcctaatgaagaacaaatttga 1180