Miyakogusa Predicted Gene

Lj5g3v2099510.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2099510.1 tr|G7IEV8|G7IEV8_MEDTR Endo-1 4-beta-xylanase
OS=Medicago truncatula GN=MTR_1g106800 PE=4
SV=1,42.95,5e-18,seg,NULL,CUFF.56639.1
         (468 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68091 similar to UniRef100_A7QL69 Cluster: Chromosome...   615   e-175

>gnl|LJGI|TC68091 similar to UniRef100_A7QL69 Cluster: Chromosome chr3 scaffold_117,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_117, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 1364

 Score =  615 bits (310), Expect = e-175
 Identities = 310/310 (100%)
 Strand = Plus / Plus

                                                                       
Query: 159 cagagtaaccacaaatggtggaggaggagcaggaggagaccagaatcctacagatcgtga 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cagagtaaccacaaatggtggaggaggagcaggaggagaccagaatcctacagatcgtga 255

                                                                       
Query: 219 tcagagaaacctaccgccacctcctcattctaagcaggagtctgttggtgctggtgacaa 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcagagaaacctaccgccacctcctcattctaagcaggagtctgttggtgctggtgacaa 315

                                                                       
Query: 279 gaaatcaaatgatcatcaggagccacccaaacattcagctcaaccaccgagatctcgctc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaaatcaaatgatcatcaggagccacccaaacattcagctcaaccaccgagatctcgctc 375

                                                                       
Query: 339 gtattatcagcatgctgaacggggtaatactgagcaggttggtcgaagtgctggtcgaag 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtattatcagcatgctgaacggggtaatactgagcaggttggtcgaagtgctggtcgaag 435

                                                                       
Query: 399 ggaagctggtggaaaagcttttgctcaaagtaaagagaatagcgaaagggtggagacaag 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggaagctggtggaaaagcttttgctcaaagtaaagagaatagcgaaagggtggagacaag 495

                     
Query: 459 tcaaagtaga 468
           ||||||||||
Sbjct: 496 tcaaagtaga 505



 Score =  145 bits (73), Expect = 3e-34
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctcaccgagactctgattcgaagcttcgccattccaagttcgatcgtgaaccaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38  atgtctcaccgagactctgattcgaagcttcgccattccaagttcgatcgtgaaccaagc 97

                        
Query: 61  cccaagagatatc 73
           |||||||||||||
Sbjct: 98  cccaagagatatc 110