Miyakogusa Predicted Gene
- Lj5g3v2065200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2065200.1 Non Chatacterized Hit- tr|E1ZGD0|E1ZGD0_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,24.74,5e-18,seg,NULL; F-box domain,F-box domain, cyclin-like;
A Receptor for Ubiquitination Targets,F-box domain,CUFF.56628.1
(1398 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62229 weakly similar to UniRef100_Q9ZUB8 Cluster: F-b... 1370 0.0
gnl|LJGI|FS346239 811 0.0
>gnl|LJGI|TC62229 weakly similar to UniRef100_Q9ZUB8 Cluster: F-box protein
At1g23780; n=1; Arabidopsis thaliana|Rep: F-box protein
At1g23780 - Arabidopsis thaliana (Mouse-ear cress),
partial (7%)
Length = 761
Score = 1370 bits (691), Expect = 0.0
Identities = 691/691 (100%)
Strand = Plus / Plus
Query: 1 atgaagttgagactcagatctctggaatccaaagaaacccacaaaatcgaagttcccgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atgaagttgagactcagatctctggaatccaaagaaacccacaaaatcgaagttcccgat 130
Query: 61 ccctgttccttgcacctactcaaaaccatcgtttctctttcaatctctggttcctccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccctgttccttgcacctactcaaaaccatcgtttctctttcaatctctggttcctccgat 190
Query: 121 tcttctctgcatctctccctcaaccggaaggacgaaatccacgcctcctcgccggacgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcttctctgcatctctccctcaaccggaaggacgaaatccacgcctcctcgccggacgac 250
Query: 181 tccctccaatccatcggcatcgccgccggcgacctcgtcttctacactctccaccctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccctccaatccatcggcatcgccgccggcgacctcgtcttctacactctccaccctaat 310
Query: 241 tccctatcccgcgaaaccctccctcacaagcccaccccacaaccagaagtatcagattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tccctatcccgcgaaaccctccctcacaagcccaccccacaaccagaagtatcagattcc 370
Query: 301 ccggaccgacccatgatccaaagctcatcggaaatcaacgctagggatgcaaagtctccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccggaccgacccatgatccaaagctcatcggaaatcaacgctagggatgcaaagtctccg 430
Query: 361 tctttggatgttacagaaccggaaaccatggaaatcgatgatgggtctgatgaggcggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tctttggatgttacagaaccggaaaccatggaaatcgatgatgggtctgatgaggcggtg 490
Query: 421 gtggggtatgggtggggtaattaccagcctttgtttgtgaaaagtgtgctcagagaagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtggggtatgggtggggtaattaccagcctttgtttgtgaaaagtgtgctcagagaagcg 550
Query: 481 gctatcggcgacgacgctagcgatttcaagctgttgattcttgcggtccatgctgttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gctatcggcgacgacgctagcgatttcaagctgttgattcttgcggtccatgctgttatt 610
Query: 541 cttgaatctgggtttattcgtgtggatcaggtttctggcatggcggttaattgctctcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cttgaatctgggtttattcgtgtggatcaggtttctggcatggcggttaattgctctcat 670
Query: 601 cttcttgatgactttccttcagggtcaagtccggtgaaatccttaaggtacactctgcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cttcttgatgactttccttcagggtcaagtccggtgaaatccttaaggtacactctgcct 730
Query: 661 gagattttgactaagggttcttctgaatctg 691
|||||||||||||||||||||||||||||||
Sbjct: 731 gagattttgactaagggttcttctgaatctg 761
>gnl|LJGI|FS346239
Length = 528
Score = 811 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Minus
Query: 990 gaagcttataatcatggaaaatcttcctggtgttgatttggctaaagtagcttgcttgaa 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaagcttataatcatggaaaatcttcctggtgttgatttggctaaagtagcttgcttgaa 469
Query: 1050 ttcagaaatgcggtatttggcctccaacaatgagctatggaagaagaagtttaaggagga 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttcagaaatgcggtatttggcctccaacaatgagctatggaagaagaagtttaaggagga 409
Query: 1110 gtttggtataggagagagtggaggacagttttttaagcatttgtttgctcagtactggac 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtttggtataggagagagtggaggacagttttttaagcatttgtttgctcagtactggac 349
Query: 1170 aacaaagaagaattcagagcaaccacgtcgtcgagcatttcagcctggtacaggattctt 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aacaaagaagaattcagagcaaccacgtcgtcgagcatttcagcctggtacaggattctt 289
Query: 1230 cccaatgagaagaaacctctatccgagaagaaaccccaatccttttggagtacctccaat 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cccaatgagaagaaacctctatccgagaagaaaccccaatccttttggagtacctccaat 229
Query: 1290 ttggggtggagaatatgatctgcagccaaacattggtggacaacttcgtgcgaacccacg 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttggggtggagaatatgatctgcagccaaacattggtggacaacttcgtgcgaacccacg 169
Query: 1350 aagggggactttccttcccccatgtcacctgggaggatttgatgcgtaa 1398
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aagggggactttccttcccccatgtcacctgggaggatttgatgcgtaa 120